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Mol. Cells 2010; 30(5): 467-476

Published online October 14, 2010

https://doi.org/10.1007/s10059-010-0143-7

© The Korean Society for Molecular and Cellular Biology

Phylogenetic Analysis and Inflow Route of Tomato Yellow Leaf Curl Virus (TYLCV) and Bemisia tabaci in Korea

Hyejung Lee1,6, Woogeun Song2,6, Hae-Ryun Kwak3, Jae-deok Kim1,3, Jungan Park1, Chung-Kyoon Auh4, Dae-Hyun Kim5, Kyeong-yeoll Lee2, Sukchan Lee1,*, and Hong-Soo Choi3,*

1Department of Genetic Engineering, Sungkyunkwan University, Suwon 440-746, Korea, 2School of Applied Biosciences, Kyungpook National University, Daegu 702-701, Korea, 3Agricultural Microbiology Division, National Academy of Agricultural Science, Suwon 441-707, Korea, 4Department of Biological Sciences, Mokpo National University, Muan 534-729, Korea, 5Fruit Research Division, National Institute of Horticultural and Herbal Science, Suwon 440-706, Korea, 6These authors contributed equally to this work.

Correspondence to : *Correspondence: cell4u@skku.edu (SL); hschoi@korea.kr (HSC)

Received: June 30, 2010; Revised: August 16, 2010; Accepted: August 26, 2010

Abstract

Tomato yellow leaf curl virus (TYLCV) is a member of the genus Begomovirus of the family Geminiviridae, mem-bers of which are characterized by closed circular single-stranded DNA genomes of 2.7-2.8 kb in length, and include viruses transmitted by the Bemisia tabaci whitefly. No reports of TYLCV in Korea are available prior to 2008, after which TYLCV spread rapidly to most regions of the southern Korean peninsula (Gyeongsang-Do, Jeolla-Do and Jeju-Do). Fifty full sequences of TYLCV were analyzed in this study, and the AC1, AV1, IR, and full sequences were analyzed via the muscle program and bayesian analysis. Phylogenetic analysis demonstrated that the Korea TYLCVs were divided into two subgroups. The TYLCV Korea 1 group (Masan) originated from TYLCV Japan (Miyazaki) and the TYLCV Korea 2 group (Jeju/Jeonju) from TYLCV Japan (Tosa/Haruno). A B. tabaci phylogenetic tree was constructed with 16S rRNA and mitochondria cytochrome oxidase I (MtCOI) sequences using the muscle program and MEGA 4.0 in the neighbor-joining algorithm. The sequence data of 16S rRNA revealed that Korea B. tabaci was closely aligned to B. tabaci isolated in Iran and Nigeria. The Q type of B. tabaci, which was originally identified as a viruliferous insect in 2008, was initially isolated in Korea as a non-viruliferous insect in 2005. Therefore, we suggest that two TYLCV Japan isolates were introduced to Korea via different routes, and then transmitted by native B. tabaci.

Keywords begomovirus, Bemisia tabaci, phylogeny, tomato, TYLCV

Article

Research Article

Mol. Cells 2010; 30(5): 467-476

Published online November 30, 2010 https://doi.org/10.1007/s10059-010-0143-7

Copyright © The Korean Society for Molecular and Cellular Biology.

Phylogenetic Analysis and Inflow Route of Tomato Yellow Leaf Curl Virus (TYLCV) and Bemisia tabaci in Korea

Hyejung Lee1,6, Woogeun Song2,6, Hae-Ryun Kwak3, Jae-deok Kim1,3, Jungan Park1, Chung-Kyoon Auh4, Dae-Hyun Kim5, Kyeong-yeoll Lee2, Sukchan Lee1,*, and Hong-Soo Choi3,*

1Department of Genetic Engineering, Sungkyunkwan University, Suwon 440-746, Korea, 2School of Applied Biosciences, Kyungpook National University, Daegu 702-701, Korea, 3Agricultural Microbiology Division, National Academy of Agricultural Science, Suwon 441-707, Korea, 4Department of Biological Sciences, Mokpo National University, Muan 534-729, Korea, 5Fruit Research Division, National Institute of Horticultural and Herbal Science, Suwon 440-706, Korea, 6These authors contributed equally to this work.

Correspondence to:*Correspondence: cell4u@skku.edu (SL); hschoi@korea.kr (HSC)

Received: June 30, 2010; Revised: August 16, 2010; Accepted: August 26, 2010

Abstract

Tomato yellow leaf curl virus (TYLCV) is a member of the genus Begomovirus of the family Geminiviridae, mem-bers of which are characterized by closed circular single-stranded DNA genomes of 2.7-2.8 kb in length, and include viruses transmitted by the Bemisia tabaci whitefly. No reports of TYLCV in Korea are available prior to 2008, after which TYLCV spread rapidly to most regions of the southern Korean peninsula (Gyeongsang-Do, Jeolla-Do and Jeju-Do). Fifty full sequences of TYLCV were analyzed in this study, and the AC1, AV1, IR, and full sequences were analyzed via the muscle program and bayesian analysis. Phylogenetic analysis demonstrated that the Korea TYLCVs were divided into two subgroups. The TYLCV Korea 1 group (Masan) originated from TYLCV Japan (Miyazaki) and the TYLCV Korea 2 group (Jeju/Jeonju) from TYLCV Japan (Tosa/Haruno). A B. tabaci phylogenetic tree was constructed with 16S rRNA and mitochondria cytochrome oxidase I (MtCOI) sequences using the muscle program and MEGA 4.0 in the neighbor-joining algorithm. The sequence data of 16S rRNA revealed that Korea B. tabaci was closely aligned to B. tabaci isolated in Iran and Nigeria. The Q type of B. tabaci, which was originally identified as a viruliferous insect in 2008, was initially isolated in Korea as a non-viruliferous insect in 2005. Therefore, we suggest that two TYLCV Japan isolates were introduced to Korea via different routes, and then transmitted by native B. tabaci.

Keywords: begomovirus, Bemisia tabaci, phylogeny, tomato, TYLCV

Mol. Cells
Nov 30, 2023 Vol.46 No.11, pp. 655~725
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