Mol. Cells 2020; 43(4): 408-418
Published online March 31, 2020
https://doi.org/10.14348/molcells.2020.2164
© The Korean Society for Molecular and Cellular Biology
Correspondence to : songh@korea.ac.kr (GHS); yhkmd@unitel.co.kr (YHK)
The sinus node (SN) is located at the apex of the cardiac conduction system, and SN dysfunction (SND)—characterized by electrical remodeling—is generally attributed to idiopathic fibrosis or ischemic injuries in the SN. SND is associated with increased risk of cardiovascular disorders, including syncope, heart failure, and atrial arrhythmias, particularly atrial fibrillation. One of the histological SND hallmarks is degenerative atrial remodeling that is associated with conduction abnormalities and increased right atrial refractoriness. Although SND is frequently accompanied by increased fibrosis in the right atrium (RA), its molecular basis still remains elusive. Therefore, we investigated whether SND can induce significant molecular changes that account for the structural remodeling of RA. Towards this, we employed a rabbit model of experimental SND, and then compared the genome-wide RNA expression profiles in RA between SND-induced rabbits and sham-operated controls to identify the differentially expressed transcripts. The accompanying gene enrichment analysis revealed extensive pro-fibrotic changes within 7 days after the SN ablation, including activation of transforming growth factor-β (TGF-β) signaling and alterations in the levels of extracellular matrix components and their regulators. Importantly, our findings suggest that periostin, a matricellular factor that regulates the development of cardiac tissue, might play a key role in mediating TGF-β-signaling-induced aberrant atrial remodeling. In conclusion, the present study provides valuable information regarding the molecular signatures underlying SND-induced atrial remodeling, and indicates that periostin can be potentially used in the diagnosis of fibroproliferative cardiac dysfunctions.
Keywords cardiac fibrosis, periostin, right atrium, sinus node dysfunction, transcriptome, transforming growth factor-β
The sinus node (SN) located in the superior right atrium (RA) is the uppermost part of the cardiac conduction system. SN dysfunction (SND) characterized by electrical remodeling has usually been attributed to age-related idiopathic fibrosis or ischemic injuries in the SN (John and Kumar, 2016). The prevalence of SND is estimated to be 1 per 1,000 person-years in individuals over 45 years of age. Its incidence increases during aging, occurring in 1 among 600 patients over 65 years of age (Dobrzynski et al., 2007; Jensen et al., 2014). SND is associated with increased risk of cardiovascular disorders, including syncope, heart failure, and atrial arrhythmias (Alonso et al., 2014). It is the most common indication for the implantation of an artificial pacemaker, and accounts for 30% to 50% of all implants in the USA (Abe et al., 2014; Bernstein and Parsonnet, 1996). SND and atrial arrhythmias, in particular atrial fibrillation (AF), frequently coexist in the elderly (Andersen et al., 1997; Connolly et al., 2000). In large population studies, the risk of AF onset among patients with SND has been estimated to be > 4-fold higher than that in normal individuals (Lamas et al., 2002; Nielsen et al., 2011). Recent studies have advanced our understanding of the pathophysiological and molecular mechanisms underlying the development and progression of SND and AF (Joung et al., 2010; Li et al., 2011; Ziyadeh-Isleem et al., 2014).
One of the histological hallmarks of SND is degenerative atrial remodeling, characterized by structural changes, conduction abnormalities, and increased right atrial refractoriness (Sanders et al., 2004). Bradycardia caused by electrical remodeling or pressure overload after heart failure may impact the atrial remodeling. Notably, SND is accompanied by structural changes in the RA such as increased atrial fibrosis along with accumulation of collagen deposits (John and Kumar, 2016; Sanders et al., 2004). Collagen accumulation replaces the degenerating myocardium, which often leads to cardiac hypertrophy (Assayag et al., 1997; Silver et al., 1990). In human hearts, senescence-related atrial fibrosis correlates well with impaired heart rate (HR) and prolonged sinoatrial conduction time (John and Kumar, 2016; Sanders et al., 2004). Despite the strong correlation between SND and atrial remodeling, the molecular and cellular bases underlying SND-induced structural remodeling remain to be elucidated.
The present study examined whether SND could induce significant changes in the RA at the molecular level that may account for the structural remodeling. For this purpose, we developed a rabbit model of experimental SND and then compared the transcriptome profiles of the RA between SND-induced and sham-operated animals to identify the differentially expressed gene (DEG) transcripts and to evaluate their functional relevance.
New Zealand white rabbits (3-3.5 kg) used in this study were obtained from Central Laboratory Animals Inc. (Korea). Male rabbits were housed at 22°C to 23°C and 50% humidity under a 12 h light/dark photoperiod (lights on at 08:00 a.m.) with free access to food and water. The rabbit SND model was established as per previously published protocols with minor modifications (Liu et al., 2012). Briefly, rabbits were anesthetized with 35 mg/kg ketamine, 5 mg/kg xylazine, and 1% to 4% isoflurane. Tracheal intubation and respiration assistance were provided with blood pressure and PaO2 monitoring. The heart was exposed by right-thoracotomy. To induce the experimental SN damage (SNX), a 3 mm diameter cotton ball soaked in 20% formaldehyde (Sigma-Aldrich, USA) was placed on the SN region between the RA and superior vena cava until a junctional rhythm or significant sinus bradycardia with an HR of 100 beats/min (bpm) was generated. Saline was used instead of formaldehyde for sham-operated controls. Then, the implantable loop recorder (RevealⓇ XT; Medtronic, USA) was inserted and fixed in the subcutaneous layer of the right chest to measure HR. The ventricular tachycardia zone of the loop recorder was set at HR > 130 bpm and the duration spent at HR > 130 bpm was recorded for successive 7 days. After the 7-day HR measurement, the animals were euthanized and myocardial tissues were isolated as follows: RA-free wall near the RA appendage, left atrial (LA) posterior wall, right ventricle (RV) mid-free wall, and left ventricular (LV) mid-free wall. All the animal experiments were approved by the Institutional Animal Care and Use Committee of Korea University, Seoul, Korea (KUIACUC-2015-46).
Isolated cardiac tissues were subjected to alcoholic dehydration and embedded in paraffin after fixation with 4% paraformaldehyde in phosphate-buffered saline for 24 h. Serial sections were prepared at 6 μm, and stained with H&E according to the standard protocol. Heart tissue sections were also subjected to Masson’s trichrome staining (MTS) to assess fibrotic lesions in accordance to a previously described protocol (Zhao et al., 2018).
Total RNA was extracted from 30 to 50 mg RA tissue using RNeasy Mini kits according to the manufacturer’s instructions (Qiagen, Germany) and RNA integrity was evaluated with an Agilent 2100 Bioanalyzer (Agilent, USA). Total RNA sequencing (RNA-Seq) for transcriptome profiling and subsequent gene enrichment analysis were carried out as previously described with minor modifications (Chung et al., 2016; Kim et al., 2018). Briefly, total RNA was subjected to ribosomal RNA depletion with Ribo-Zero reagent and then cDNA libraries were prepared using the TruSeq Stranded Total RNA prep kit according to the manufacturer’s instructions (Illumina, USA). Primary sequence data were acquired using paired-end sequencing by HiSeq 2500 sequencing platform (Illumina), and raw reads were then pre-processed by removing the adapter and low-quality sequences (< Q20) by using Trimmomatic with default parameters. TopHat (ver. 2.0.13;
For the selected DEGs identified by the transcriptome analysis, we validated alterations in expression using quantitative reverse transcription-polymerase chain reaction (qRT-PCR) as described previously (Chung et al., 2016). We reverse-transcribed 500 ng RNA with MMLV reverse transcriptase (Promega, USA). The resulting cDNA was subjected to qPCR with SYBR Green I and ROX (as a passive dye) (Sigma-Aldrich). Glyceraldehyde-3-phosphate dehydrogenase (
Anti-periostin (sc49480; Santa Cruz, USA), anti-TGF-β1 (MA5-16949; Invitrogen, USA), and β-actin (A2228; Sigma-Aldrich) antibodies were commercially obtained. Immunoblotting and accompanying densitometric analyses were carried out as described previously (Chung et al., 2017). Whole-cell extracts were resolved on sodium dodecyl sulfate-polyacrylamide gels and transferred onto polyvinylidene fluoride membranes (Millipore, USA). The blots were blocked with Tris-buffered saline containing 0.3% Tween 20 and 3% bovine serum albumin and incubated with the primary antibodies at room temperature for 1 h. Antibody binding was detected by incubation with secondary antibodies linked to horseradish peroxidase (Jackson ImmunoResearch Laboratories, USA) accompanied by visualization using enhanced chemiluminescence reagents (Thermo Fisher Scientific, USA). Optical densities of immunoreactive bands were quantified using NIH ImageJ software (
Results are expressed as mean ± SEM. Differences in HR measurement, qRT-PCR, and immunoblotting analyses between groups were statistically evaluated using unpaired Student’s t-test. A
Among the original 13 rabbits subjected to SNX, seven animals survived and five were successfully modeled for SND. The mean baseline HRs of the rabbits with SNX did not significantly differ from those observed in control (CTL) animals before modeling (183.67 ± 3.48 bpm for CTL vs 184.20 ± 4.26 bpm for SNX,
To explore the molecular signatures underlying SNX-induced atrial remodeling, we compared the genome-wide RNA expression profiles of RA tissues from CTL and SNX rabbits by RNA-Seq. We identified 641 DEG transcripts between the two groups. The top 30 mRNA species differentially expressed at the highest levels are shown (Fig. 2 and Supplementary Table S1 for the full list of the DEGs). It is noteworthy that the expression of gene transcripts coding for the extracellular matrix (ECM) components and their regulators such as macrophage collagens (COLs), fibronectin 1 (FN1), and metalloelastases (MMPs) suggests the structural remodeling of myocardium. To gain more systemic insights, we next categorized the DEGs set using IPA. The IPA canonical pathway analysis on the DEGs revealed significantly enriched pathways in the SNX RA, including the GP6 (Glycoprotein 6) signaling pathway, actin cytoskeleton signaling, TREM1 (Triggering receptor expressed on myeloid cells 1) signaling, Rac signaling, and neuroinflammation signaling (Table 1). Furthermore, these canonical pathways were significantly biased towards activation (Z-scores > 2.0 for the top 10 pathways listed in Table 1). To further examine the functional impact of SNX, we also used the functional analysis tools of IPA to analyze the DEGs. In the enrichment analysis by biological functions/diseases in the IPA, inflammatory response in the category of “Diseases and disorders”, cellular movement in “Molecular and cellular functions”, and cardiovascular system and function in “Physiological system development and function” were the most significant terms in each category (Table 2). IPA analysis for upstream regulators predicted by DEGs suggested TGF-β1 (transforming growth factor beta 1 coded by
We then focused on the 21 DEGs belonging to at least one functional category listed in Tables 2 and 3 and validated their expression patterns by qRT-PCR (Fig. 3). Fifteen of these genes were categorized as downstream targets of TGF-β signaling in the IPA. Among the significantly upregulated transcripts,
It should be noted that
In the present study, we successfully induced the cardiac dysfunctions characterized by bradycardia as well as atrial fibrosis in a rabbit model of SND and then identified a set of genes whose transcripts exhibited altered expression in the RA. In agreement with increasing evidence―from both experimental and clinical studies―that indicates a close relationship between SND, AF, and atrial fibrosis (John and Kumar, 2016), we clearly showed that impaired SN function leads to a huge change in the expression of genes, particularly those related to the structural remodeling of RA within 7 days after SNX. Considering that a clear AF was not observed in our model, the fibrotic remodeling in RA appears to be induced by the experimental SND regardless of the onset of AF.
Our transcriptome analysis revealed that > 75% of the DEGs showed increased expression in the SNX group, and subsequent gene enrichment analysis suggested that extensive ECM remodeling occurred in the RA tissue. Indeed, more than half of the top 20 upregulated DEGs listed in Fig. 2B―
Induction of
As noted earlier, SND and AF frequently coexist and interact to initiate each other although the underlying mechanisms that link them are not fully defined (John and Kumar, 2016). Growing evidence suggests that AF can cause anatomical and/or electrophysiological remodeling within the SN and surrounding atrial tissues leading to SND development. For example, animal AF models stimulated by persistent rapid atrial pacing resulted in SND characterized by prolonged SN recovery time and slow intrinsic HR along with atrial fibrosis (He et al., 2016; Morillo et al., 1995; Mulla et al., 2019; Wijffels et al., 1995). In contrast, we demonstrated that the SNX employed to recapitulate permanent SND caused by intrinsic factors led to atrial fibrosis within a week regardless of the AF onset. Indeed, both clinical and experimental findings support the hypothesis that prolonged impairment of SN function could be linked to the onset of atrial fibrosis independent of AF. In agreement with our results, atrial fibrosis is commonly observed among different SNX models generated using chemical reagents or genetic strategies (Herrmann et al., 2011; Zhong et al., 2018). More importantly, patients with conditions associated with atrial remodeling and atrial stretch exhibit impaired SN functions even in the absence of atrial arrhythmias (Medi et al., 2012; Morton et al., 2003; Sanders et al., 2004). However, it is unclear whether SNX-induced bradycardia causes fibrotic alterations in atrial tissues, while bradycardia itself has been proposed to facilitate the development of conditions conducive to AF occurrence (Amasyali et al., 2014). Nevertheless, initiation of fibrotic remodeling in atrial tissues by SNX may provide an additional link between SND and AF because fibrosis-induced disorganization of electric coupling in the atrium results in increased automaticity and atrial ectopy, thereby potentiating cardiac arrhythmias (Platonov, 2017; Xie et al., 2009).
Of interest, a robust induction of
Secreted periostin can physically or functionally interact with various ECM proteins such as tenascin C (TNC), a subset of collagens, and lysyl oxidase (coded by
In conclusion, the present study demonstrates that impaired SN function can directly lead to adverse structural remodeling of the RA tissue through activation of pro-fibrotic signaling and provides valuable information about the molecular signatures underlying this process. Although the renin-angiotensin II pathway-dependent TGF-β signaling activation has been implicated in atrial fibrosis initiation, our findings strongly suggest that periostin may have an additional role in not only mediating, but also reinforcing the feedback mechanism underlying TGF-β signaling-mediated aberrant ECM deposition. Notably, periostin profiles of body fluids have been proposed as potential biomarkers for several human diseases particularly those linked with inflammatory or fibrotic responses, such as asthma, skin-related disorders, and renal diseases (Inoue et al., 2016; Prakoura and Chatziantoniou, 2017; Yamaguchi, 2014). The remarkable upregulation of periostin expression in association with cardiac fibrosis raises the possibility of its diagnostic application as a less invasive biomarker for cardiac dysfunctions in addition to its therapeutic potential.
This work was supported by the Ministry of Science and ICT through the National Research Foundation of Korea (NRF-2015M3A9E7029176 and NRF-2016M3C7A1904340 to G.H.S., and NRF-2017R1C1B5017935 to S.Y.R.). J.S. and G.H.S. were supported by the Korea University Research Grant.
Top canonical pathways
Ingenuity canonical pathway | Z scoreb | Overlap | |
---|---|---|---|
GP6 signaling pathway | 5.89E-06 | 4.00 | 16/82 (0.195) |
Actin cytoskeleton signaling | 1.00E-05 | 3.44 | 23/157 (0.146) |
Th17 activation pathway | 2.24E-05 | 2.33 | 10/38 (0.263) |
Leukocyte extravasation signaling | 6.76E-05 | 3.90 | 19/131 (0.145) |
ILK signaling | 8.32E-05 | 2.67 | 20/144 (0.139) |
Macropinocytosis signaling | 1.29E-04 | 2.65 | 12/64 (0.188) |
TREM1 signaling | 2.63E-04 | 3.00 | 9/41 (0.220) |
Rac signaling | 2.95E-04 | 3.61 | 14/90 (0.156) |
Agrin interactions at neuromuscular junction | 4.47E-04 | 3.16 | 10/53 (0.189) |
Neuroinflammation signaling | 5.75E-04 | 3.27 | 22/191 (0.115) |
a
Top diseases and biological functions
Category | No. of molecules | |
---|---|---|
Diseases and disorders | ||
Inflammatory response | 1.70E-06 – 1.50E-18 | 208 |
Developmental disorder | 2.53E-06 – 3.48E-17 | 72 |
Hereditary disorder | 2.53E-06 – 3.48E-17 | 116 |
Organismal injury and abnormalities | 2.55E-06 – 3.48E-17 | 442 |
Skeletal and muscular disorder | 2.53E-06 – 3.48E-17 | 184 |
Molecular and cellular functions | ||
Cellular movement | 1.99E-06 – 5.12E-28 | 209 |
Cell-to-cell signaling and interaction | 2.46E-06 – 8.25E-16 | 151 |
Cellular development | 2.35E-06 – 1.42E-14 | 212 |
Cellular assembly and organization | 1.31E-06 – 2.96E-12 | 80 |
Cellular function and maintenance | 2.04E-06 – 2.96E−12 | 152 |
Physiological system development and function | ||
Cardiovascular system and function | 1.48E-06 – 2.58E-20 | 157 |
Organismal development | 1.51E-06 – 2.58E-20 | 207 |
Tissue development | 1.84E-06 – 1.36E-19 | 233 |
Connective tissue development and function | 1.84E-06 – 3.13E-19 | 161 |
Skeletal & muscular system development and function | 2.27E-06 – 3.13E-19 | 108 |
a
Top 10 upstream regulators with altered mRNA expression
Symbol | FCa | Type | Z scorec | No. of targets | |
---|---|---|---|---|---|
TGFB1 | 3.05 | Growth factor | 2.19E-29 | 5.52 | 80 |
AHR | 2.99 | Nuclear receptor | 1.77E-11 | 2.56 | 36 |
CTGF | 4.48 | Growth factor | 2.77E-09 | 2.08 | 15 |
IL6R | 2.39 | Transmembrane receptor | 1.29E-08 | 2.02 | 11 |
SPP1 | 9.27 | Cytokine | 1.11E-07 | 2.31 | 17 |
HIF1A | 2.79 | Transcription regulator | 1.15E-07 | 3.27 | 32 |
FBN1 | 2.82 | Other | 1.50E-07 | −2.61 | 8 |
ETV5 | 2.60 | Transcription regulator | 3.13E-06 | 2.33 | 13 |
FN1 | 22.28 | Enzyme | 1.09E-05 | 2.20 | 8 |
FOXM1 | 3.55 | Transcription regulator | 1.19E-05 | 3.48 | 14 |
a Fold changes (FCs) in mRNA expression. b
Mol. Cells 2020; 43(4): 408-418
Published online April 30, 2020 https://doi.org/10.14348/molcells.2020.2164
Copyright © The Korean Society for Molecular and Cellular Biology.
Seung-Young Roh1,5 , Ji Yeon Kim2,5
, Hyo Kyeong Cha2
, Hye Young Lim2
, Youngran Park2
, Kwang-No Lee3
, Jaemin Shim3
, Jong-Il Choi3
, Young-Hoon Kim3,*
, and Gi Hoon Son2,4,*
1Division of Cardiology, Department of Internal Medicine, Korea University College of Medicine and Korea University Guro Hospital, Seoul 08308, Korea, 2Department of Biomedical Sciences, College of Medicine, Korea University, Seoul 02841, Korea, 3Division of Cardiology, Department of Internal Medicine, Korea University College of Medicine and Korea University Anam Hospital, Seoul 02841, Korea, 4Department of Legal Medicine, College of Medicine, Korea University, Seoul 02841, Korea, 5These authors contributed equally to this work.
Correspondence to:songh@korea.ac.kr (GHS); yhkmd@unitel.co.kr (YHK)
The sinus node (SN) is located at the apex of the cardiac conduction system, and SN dysfunction (SND)—characterized by electrical remodeling—is generally attributed to idiopathic fibrosis or ischemic injuries in the SN. SND is associated with increased risk of cardiovascular disorders, including syncope, heart failure, and atrial arrhythmias, particularly atrial fibrillation. One of the histological SND hallmarks is degenerative atrial remodeling that is associated with conduction abnormalities and increased right atrial refractoriness. Although SND is frequently accompanied by increased fibrosis in the right atrium (RA), its molecular basis still remains elusive. Therefore, we investigated whether SND can induce significant molecular changes that account for the structural remodeling of RA. Towards this, we employed a rabbit model of experimental SND, and then compared the genome-wide RNA expression profiles in RA between SND-induced rabbits and sham-operated controls to identify the differentially expressed transcripts. The accompanying gene enrichment analysis revealed extensive pro-fibrotic changes within 7 days after the SN ablation, including activation of transforming growth factor-β (TGF-β) signaling and alterations in the levels of extracellular matrix components and their regulators. Importantly, our findings suggest that periostin, a matricellular factor that regulates the development of cardiac tissue, might play a key role in mediating TGF-β-signaling-induced aberrant atrial remodeling. In conclusion, the present study provides valuable information regarding the molecular signatures underlying SND-induced atrial remodeling, and indicates that periostin can be potentially used in the diagnosis of fibroproliferative cardiac dysfunctions.
Keywords: cardiac fibrosis, periostin, right atrium, sinus node dysfunction, transcriptome, transforming growth factor-β
The sinus node (SN) located in the superior right atrium (RA) is the uppermost part of the cardiac conduction system. SN dysfunction (SND) characterized by electrical remodeling has usually been attributed to age-related idiopathic fibrosis or ischemic injuries in the SN (John and Kumar, 2016). The prevalence of SND is estimated to be 1 per 1,000 person-years in individuals over 45 years of age. Its incidence increases during aging, occurring in 1 among 600 patients over 65 years of age (Dobrzynski et al., 2007; Jensen et al., 2014). SND is associated with increased risk of cardiovascular disorders, including syncope, heart failure, and atrial arrhythmias (Alonso et al., 2014). It is the most common indication for the implantation of an artificial pacemaker, and accounts for 30% to 50% of all implants in the USA (Abe et al., 2014; Bernstein and Parsonnet, 1996). SND and atrial arrhythmias, in particular atrial fibrillation (AF), frequently coexist in the elderly (Andersen et al., 1997; Connolly et al., 2000). In large population studies, the risk of AF onset among patients with SND has been estimated to be > 4-fold higher than that in normal individuals (Lamas et al., 2002; Nielsen et al., 2011). Recent studies have advanced our understanding of the pathophysiological and molecular mechanisms underlying the development and progression of SND and AF (Joung et al., 2010; Li et al., 2011; Ziyadeh-Isleem et al., 2014).
One of the histological hallmarks of SND is degenerative atrial remodeling, characterized by structural changes, conduction abnormalities, and increased right atrial refractoriness (Sanders et al., 2004). Bradycardia caused by electrical remodeling or pressure overload after heart failure may impact the atrial remodeling. Notably, SND is accompanied by structural changes in the RA such as increased atrial fibrosis along with accumulation of collagen deposits (John and Kumar, 2016; Sanders et al., 2004). Collagen accumulation replaces the degenerating myocardium, which often leads to cardiac hypertrophy (Assayag et al., 1997; Silver et al., 1990). In human hearts, senescence-related atrial fibrosis correlates well with impaired heart rate (HR) and prolonged sinoatrial conduction time (John and Kumar, 2016; Sanders et al., 2004). Despite the strong correlation between SND and atrial remodeling, the molecular and cellular bases underlying SND-induced structural remodeling remain to be elucidated.
The present study examined whether SND could induce significant changes in the RA at the molecular level that may account for the structural remodeling. For this purpose, we developed a rabbit model of experimental SND and then compared the transcriptome profiles of the RA between SND-induced and sham-operated animals to identify the differentially expressed gene (DEG) transcripts and to evaluate their functional relevance.
New Zealand white rabbits (3-3.5 kg) used in this study were obtained from Central Laboratory Animals Inc. (Korea). Male rabbits were housed at 22°C to 23°C and 50% humidity under a 12 h light/dark photoperiod (lights on at 08:00 a.m.) with free access to food and water. The rabbit SND model was established as per previously published protocols with minor modifications (Liu et al., 2012). Briefly, rabbits were anesthetized with 35 mg/kg ketamine, 5 mg/kg xylazine, and 1% to 4% isoflurane. Tracheal intubation and respiration assistance were provided with blood pressure and PaO2 monitoring. The heart was exposed by right-thoracotomy. To induce the experimental SN damage (SNX), a 3 mm diameter cotton ball soaked in 20% formaldehyde (Sigma-Aldrich, USA) was placed on the SN region between the RA and superior vena cava until a junctional rhythm or significant sinus bradycardia with an HR of 100 beats/min (bpm) was generated. Saline was used instead of formaldehyde for sham-operated controls. Then, the implantable loop recorder (RevealⓇ XT; Medtronic, USA) was inserted and fixed in the subcutaneous layer of the right chest to measure HR. The ventricular tachycardia zone of the loop recorder was set at HR > 130 bpm and the duration spent at HR > 130 bpm was recorded for successive 7 days. After the 7-day HR measurement, the animals were euthanized and myocardial tissues were isolated as follows: RA-free wall near the RA appendage, left atrial (LA) posterior wall, right ventricle (RV) mid-free wall, and left ventricular (LV) mid-free wall. All the animal experiments were approved by the Institutional Animal Care and Use Committee of Korea University, Seoul, Korea (KUIACUC-2015-46).
Isolated cardiac tissues were subjected to alcoholic dehydration and embedded in paraffin after fixation with 4% paraformaldehyde in phosphate-buffered saline for 24 h. Serial sections were prepared at 6 μm, and stained with H&E according to the standard protocol. Heart tissue sections were also subjected to Masson’s trichrome staining (MTS) to assess fibrotic lesions in accordance to a previously described protocol (Zhao et al., 2018).
Total RNA was extracted from 30 to 50 mg RA tissue using RNeasy Mini kits according to the manufacturer’s instructions (Qiagen, Germany) and RNA integrity was evaluated with an Agilent 2100 Bioanalyzer (Agilent, USA). Total RNA sequencing (RNA-Seq) for transcriptome profiling and subsequent gene enrichment analysis were carried out as previously described with minor modifications (Chung et al., 2016; Kim et al., 2018). Briefly, total RNA was subjected to ribosomal RNA depletion with Ribo-Zero reagent and then cDNA libraries were prepared using the TruSeq Stranded Total RNA prep kit according to the manufacturer’s instructions (Illumina, USA). Primary sequence data were acquired using paired-end sequencing by HiSeq 2500 sequencing platform (Illumina), and raw reads were then pre-processed by removing the adapter and low-quality sequences (< Q20) by using Trimmomatic with default parameters. TopHat (ver. 2.0.13;
For the selected DEGs identified by the transcriptome analysis, we validated alterations in expression using quantitative reverse transcription-polymerase chain reaction (qRT-PCR) as described previously (Chung et al., 2016). We reverse-transcribed 500 ng RNA with MMLV reverse transcriptase (Promega, USA). The resulting cDNA was subjected to qPCR with SYBR Green I and ROX (as a passive dye) (Sigma-Aldrich). Glyceraldehyde-3-phosphate dehydrogenase (
Anti-periostin (sc49480; Santa Cruz, USA), anti-TGF-β1 (MA5-16949; Invitrogen, USA), and β-actin (A2228; Sigma-Aldrich) antibodies were commercially obtained. Immunoblotting and accompanying densitometric analyses were carried out as described previously (Chung et al., 2017). Whole-cell extracts were resolved on sodium dodecyl sulfate-polyacrylamide gels and transferred onto polyvinylidene fluoride membranes (Millipore, USA). The blots were blocked with Tris-buffered saline containing 0.3% Tween 20 and 3% bovine serum albumin and incubated with the primary antibodies at room temperature for 1 h. Antibody binding was detected by incubation with secondary antibodies linked to horseradish peroxidase (Jackson ImmunoResearch Laboratories, USA) accompanied by visualization using enhanced chemiluminescence reagents (Thermo Fisher Scientific, USA). Optical densities of immunoreactive bands were quantified using NIH ImageJ software (
Results are expressed as mean ± SEM. Differences in HR measurement, qRT-PCR, and immunoblotting analyses between groups were statistically evaluated using unpaired Student’s t-test. A
Among the original 13 rabbits subjected to SNX, seven animals survived and five were successfully modeled for SND. The mean baseline HRs of the rabbits with SNX did not significantly differ from those observed in control (CTL) animals before modeling (183.67 ± 3.48 bpm for CTL vs 184.20 ± 4.26 bpm for SNX,
To explore the molecular signatures underlying SNX-induced atrial remodeling, we compared the genome-wide RNA expression profiles of RA tissues from CTL and SNX rabbits by RNA-Seq. We identified 641 DEG transcripts between the two groups. The top 30 mRNA species differentially expressed at the highest levels are shown (Fig. 2 and Supplementary Table S1 for the full list of the DEGs). It is noteworthy that the expression of gene transcripts coding for the extracellular matrix (ECM) components and their regulators such as macrophage collagens (COLs), fibronectin 1 (FN1), and metalloelastases (MMPs) suggests the structural remodeling of myocardium. To gain more systemic insights, we next categorized the DEGs set using IPA. The IPA canonical pathway analysis on the DEGs revealed significantly enriched pathways in the SNX RA, including the GP6 (Glycoprotein 6) signaling pathway, actin cytoskeleton signaling, TREM1 (Triggering receptor expressed on myeloid cells 1) signaling, Rac signaling, and neuroinflammation signaling (Table 1). Furthermore, these canonical pathways were significantly biased towards activation (Z-scores > 2.0 for the top 10 pathways listed in Table 1). To further examine the functional impact of SNX, we also used the functional analysis tools of IPA to analyze the DEGs. In the enrichment analysis by biological functions/diseases in the IPA, inflammatory response in the category of “Diseases and disorders”, cellular movement in “Molecular and cellular functions”, and cardiovascular system and function in “Physiological system development and function” were the most significant terms in each category (Table 2). IPA analysis for upstream regulators predicted by DEGs suggested TGF-β1 (transforming growth factor beta 1 coded by
We then focused on the 21 DEGs belonging to at least one functional category listed in Tables 2 and 3 and validated their expression patterns by qRT-PCR (Fig. 3). Fifteen of these genes were categorized as downstream targets of TGF-β signaling in the IPA. Among the significantly upregulated transcripts,
It should be noted that
In the present study, we successfully induced the cardiac dysfunctions characterized by bradycardia as well as atrial fibrosis in a rabbit model of SND and then identified a set of genes whose transcripts exhibited altered expression in the RA. In agreement with increasing evidence―from both experimental and clinical studies―that indicates a close relationship between SND, AF, and atrial fibrosis (John and Kumar, 2016), we clearly showed that impaired SN function leads to a huge change in the expression of genes, particularly those related to the structural remodeling of RA within 7 days after SNX. Considering that a clear AF was not observed in our model, the fibrotic remodeling in RA appears to be induced by the experimental SND regardless of the onset of AF.
Our transcriptome analysis revealed that > 75% of the DEGs showed increased expression in the SNX group, and subsequent gene enrichment analysis suggested that extensive ECM remodeling occurred in the RA tissue. Indeed, more than half of the top 20 upregulated DEGs listed in Fig. 2B―
Induction of
As noted earlier, SND and AF frequently coexist and interact to initiate each other although the underlying mechanisms that link them are not fully defined (John and Kumar, 2016). Growing evidence suggests that AF can cause anatomical and/or electrophysiological remodeling within the SN and surrounding atrial tissues leading to SND development. For example, animal AF models stimulated by persistent rapid atrial pacing resulted in SND characterized by prolonged SN recovery time and slow intrinsic HR along with atrial fibrosis (He et al., 2016; Morillo et al., 1995; Mulla et al., 2019; Wijffels et al., 1995). In contrast, we demonstrated that the SNX employed to recapitulate permanent SND caused by intrinsic factors led to atrial fibrosis within a week regardless of the AF onset. Indeed, both clinical and experimental findings support the hypothesis that prolonged impairment of SN function could be linked to the onset of atrial fibrosis independent of AF. In agreement with our results, atrial fibrosis is commonly observed among different SNX models generated using chemical reagents or genetic strategies (Herrmann et al., 2011; Zhong et al., 2018). More importantly, patients with conditions associated with atrial remodeling and atrial stretch exhibit impaired SN functions even in the absence of atrial arrhythmias (Medi et al., 2012; Morton et al., 2003; Sanders et al., 2004). However, it is unclear whether SNX-induced bradycardia causes fibrotic alterations in atrial tissues, while bradycardia itself has been proposed to facilitate the development of conditions conducive to AF occurrence (Amasyali et al., 2014). Nevertheless, initiation of fibrotic remodeling in atrial tissues by SNX may provide an additional link between SND and AF because fibrosis-induced disorganization of electric coupling in the atrium results in increased automaticity and atrial ectopy, thereby potentiating cardiac arrhythmias (Platonov, 2017; Xie et al., 2009).
Of interest, a robust induction of
Secreted periostin can physically or functionally interact with various ECM proteins such as tenascin C (TNC), a subset of collagens, and lysyl oxidase (coded by
In conclusion, the present study demonstrates that impaired SN function can directly lead to adverse structural remodeling of the RA tissue through activation of pro-fibrotic signaling and provides valuable information about the molecular signatures underlying this process. Although the renin-angiotensin II pathway-dependent TGF-β signaling activation has been implicated in atrial fibrosis initiation, our findings strongly suggest that periostin may have an additional role in not only mediating, but also reinforcing the feedback mechanism underlying TGF-β signaling-mediated aberrant ECM deposition. Notably, periostin profiles of body fluids have been proposed as potential biomarkers for several human diseases particularly those linked with inflammatory or fibrotic responses, such as asthma, skin-related disorders, and renal diseases (Inoue et al., 2016; Prakoura and Chatziantoniou, 2017; Yamaguchi, 2014). The remarkable upregulation of periostin expression in association with cardiac fibrosis raises the possibility of its diagnostic application as a less invasive biomarker for cardiac dysfunctions in addition to its therapeutic potential.
This work was supported by the Ministry of Science and ICT through the National Research Foundation of Korea (NRF-2015M3A9E7029176 and NRF-2016M3C7A1904340 to G.H.S., and NRF-2017R1C1B5017935 to S.Y.R.). J.S. and G.H.S. were supported by the Korea University Research Grant.
. Top canonical pathways.
Ingenuity canonical pathway | Z scoreb | Overlap | |
---|---|---|---|
GP6 signaling pathway | 5.89E-06 | 4.00 | 16/82 (0.195) |
Actin cytoskeleton signaling | 1.00E-05 | 3.44 | 23/157 (0.146) |
Th17 activation pathway | 2.24E-05 | 2.33 | 10/38 (0.263) |
Leukocyte extravasation signaling | 6.76E-05 | 3.90 | 19/131 (0.145) |
ILK signaling | 8.32E-05 | 2.67 | 20/144 (0.139) |
Macropinocytosis signaling | 1.29E-04 | 2.65 | 12/64 (0.188) |
TREM1 signaling | 2.63E-04 | 3.00 | 9/41 (0.220) |
Rac signaling | 2.95E-04 | 3.61 | 14/90 (0.156) |
Agrin interactions at neuromuscular junction | 4.47E-04 | 3.16 | 10/53 (0.189) |
Neuroinflammation signaling | 5.75E-04 | 3.27 | 22/191 (0.115) |
a
. Top diseases and biological functions.
Category | No. of molecules | |
---|---|---|
Diseases and disorders | ||
Inflammatory response | 1.70E-06 – 1.50E-18 | 208 |
Developmental disorder | 2.53E-06 – 3.48E-17 | 72 |
Hereditary disorder | 2.53E-06 – 3.48E-17 | 116 |
Organismal injury and abnormalities | 2.55E-06 – 3.48E-17 | 442 |
Skeletal and muscular disorder | 2.53E-06 – 3.48E-17 | 184 |
Molecular and cellular functions | ||
Cellular movement | 1.99E-06 – 5.12E-28 | 209 |
Cell-to-cell signaling and interaction | 2.46E-06 – 8.25E-16 | 151 |
Cellular development | 2.35E-06 – 1.42E-14 | 212 |
Cellular assembly and organization | 1.31E-06 – 2.96E-12 | 80 |
Cellular function and maintenance | 2.04E-06 – 2.96E−12 | 152 |
Physiological system development and function | ||
Cardiovascular system and function | 1.48E-06 – 2.58E-20 | 157 |
Organismal development | 1.51E-06 – 2.58E-20 | 207 |
Tissue development | 1.84E-06 – 1.36E-19 | 233 |
Connective tissue development and function | 1.84E-06 – 3.13E-19 | 161 |
Skeletal & muscular system development and function | 2.27E-06 – 3.13E-19 | 108 |
a
. Top 10 upstream regulators with altered mRNA expression.
Symbol | FCa | Type | Z scorec | No. of targets | |
---|---|---|---|---|---|
TGFB1 | 3.05 | Growth factor | 2.19E-29 | 5.52 | 80 |
AHR | 2.99 | Nuclear receptor | 1.77E-11 | 2.56 | 36 |
CTGF | 4.48 | Growth factor | 2.77E-09 | 2.08 | 15 |
IL6R | 2.39 | Transmembrane receptor | 1.29E-08 | 2.02 | 11 |
SPP1 | 9.27 | Cytokine | 1.11E-07 | 2.31 | 17 |
HIF1A | 2.79 | Transcription regulator | 1.15E-07 | 3.27 | 32 |
FBN1 | 2.82 | Other | 1.50E-07 | −2.61 | 8 |
ETV5 | 2.60 | Transcription regulator | 3.13E-06 | 2.33 | 13 |
FN1 | 22.28 | Enzyme | 1.09E-05 | 2.20 | 8 |
FOXM1 | 3.55 | Transcription regulator | 1.19E-05 | 3.48 | 14 |
a Fold changes (FCs) in mRNA expression. b
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