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Mol. Cells 2013; 36(2): 169-176

Published online July 12, 2013

https://doi.org/10.1007/s10059-013-0152-4

© The Korean Society for Molecular and Cellular Biology

Differential Anoxic Expression of Sugar-Regulated Genes Reveals Diverse Interactions between Sugar and Anaerobic Signaling Systems in Rice

Mi-na Lim, Sung-eun Lee, Hui-kyeong Yim, Jeong Hoe Kim, In Sun Yoon, and Yong-sic Hwang

Department of Bioscience and Biotechnology, Konkuk University, Seoul 143-701, Korea, 1Department of Biology, Kyungbook National University, Daegu 702-701, Korea, 2Molecular Breeding Division, Natural Academy of Agricultural Science, Rural Development Adminstration, Suwon 441-857, Korea

Received: May 13, 2013; Revised: June 12, 2013; Accepted: June 14, 2013

Abstract

The interaction between the dual roles of sugar as a metabolic fuel and a regulatory molecule was unveiled by examining the changes in sugar signaling upon oxygen deprivation, which causes the drastic alteration in the cellular energy status. In our study, the expression of anaerobically induced genes is commonly responsive to sugar, either under the control of hexokinase or non-hexokinase mediated signaling cascades. Only sugar regulation via the hexokinase pathway was susceptible for O2 deficiency or energy deficit conditions evoked by uncoupler. Examination of sugar regulation of those genes under anaerobic conditions revealed the presence of multiple paths underlying
anaerobic induction of gene expression in rice, subgrouped into three distinct types. The first of these, which was found in type-1 genes, involved neither sugar regulation nor additional anaerobic induction under anoxia, indicating that anoxic induction is a simple result from the release of sugar repression by O2-deficient conditions. In contrast, type-2 genes also showed no sugar regulation, albeit with enhanced expression under anoxia. Lastly, expression of type-3 genes is highly enhanced with sugar regulation sustained under anoxia. Intriguingly, the inhibition of the mitochondrial ATP synthesis can reproduce expression pattern of a specific set of anaerobically induced
genes, implying that rice cells may sense O2 deprivation, partly via perception of the perturbed cellular energy status. Our study of interaction between sugar signaling and anaerobic conditions has revealed that sugar signaling and the cellular energy status are likely to communicate with each other and influence anaerobic induction of gene expression in rice.

Keywords anoxia, energy, hexokinase, oxidative phosphorylation, sugar signaling

Article

Research Article

Mol. Cells 2013; 36(2): 169-176

Published online August 31, 2013 https://doi.org/10.1007/s10059-013-0152-4

Copyright © The Korean Society for Molecular and Cellular Biology.

Differential Anoxic Expression of Sugar-Regulated Genes Reveals Diverse Interactions between Sugar and Anaerobic Signaling Systems in Rice

Mi-na Lim, Sung-eun Lee, Hui-kyeong Yim, Jeong Hoe Kim, In Sun Yoon, and Yong-sic Hwang

Department of Bioscience and Biotechnology, Konkuk University, Seoul 143-701, Korea, 1Department of Biology, Kyungbook National University, Daegu 702-701, Korea, 2Molecular Breeding Division, Natural Academy of Agricultural Science, Rural Development Adminstration, Suwon 441-857, Korea

Received: May 13, 2013; Revised: June 12, 2013; Accepted: June 14, 2013

Abstract

The interaction between the dual roles of sugar as a metabolic fuel and a regulatory molecule was unveiled by examining the changes in sugar signaling upon oxygen deprivation, which causes the drastic alteration in the cellular energy status. In our study, the expression of anaerobically induced genes is commonly responsive to sugar, either under the control of hexokinase or non-hexokinase mediated signaling cascades. Only sugar regulation via the hexokinase pathway was susceptible for O2 deficiency or energy deficit conditions evoked by uncoupler. Examination of sugar regulation of those genes under anaerobic conditions revealed the presence of multiple paths underlying
anaerobic induction of gene expression in rice, subgrouped into three distinct types. The first of these, which was found in type-1 genes, involved neither sugar regulation nor additional anaerobic induction under anoxia, indicating that anoxic induction is a simple result from the release of sugar repression by O2-deficient conditions. In contrast, type-2 genes also showed no sugar regulation, albeit with enhanced expression under anoxia. Lastly, expression of type-3 genes is highly enhanced with sugar regulation sustained under anoxia. Intriguingly, the inhibition of the mitochondrial ATP synthesis can reproduce expression pattern of a specific set of anaerobically induced
genes, implying that rice cells may sense O2 deprivation, partly via perception of the perturbed cellular energy status. Our study of interaction between sugar signaling and anaerobic conditions has revealed that sugar signaling and the cellular energy status are likely to communicate with each other and influence anaerobic induction of gene expression in rice.

Keywords: anoxia, energy, hexokinase, oxidative phosphorylation, sugar signaling

Mol. Cells
Sep 30, 2023 Vol.46 No.9, pp. 527~572
COVER PICTURE
Chronic obstructive pulmonary disease (COPD) is marked by airspace enlargement (emphysema) and small airway fibrosis, leading to airflow obstruction and eventual respiratory failure. Shown is a microphotograph of hematoxylin and eosin (H&E)-stained histological sections of the enlarged alveoli as an indicator of emphysema. Piao et al. (pp. 558-572) demonstrate that recombinant human hyaluronan and proteoglycan link protein 1 (rhHAPLN1) significantly reduces the extended airspaces of the emphysematous alveoli by increasing the levels of TGF-β receptor I and SIRT1/6, as a previously unrecognized mechanism in human alveolar epithelial cells, and consequently mitigates COPD.

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