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Mol. Cells 2013; 35(4): 320-326

Published online April 4, 2013

https://doi.org/10.1007/s10059-013-2316-7

© The Korean Society for Molecular and Cellular Biology

RNA Interference-Mediated Simultaneous Silencing of Four Genes Using Cross-Shaped RNA

Tae Yeon Lee, Chan Il Chang, Dooyoung Lee, Sun Woo Hong, Chanseok Shin4, Chiang J. Li, Soyoun Kim, Dirk Haussecker, and Dong-ki Lee

1Global Research Laboratory for RNAi Medicine, Department of Chemistry, Sungkyunkwan University, Suwon 440-746, Korea, 2Skip Acker-man Center for Molecular Therapeutics, Beth Israel Deconness Medical Center, Harvard Medical School, Boston, USA, 3BMT Inc., Seoul 153-777, Korea, 4Depart-ment of Agricultural Biotechnology, Seoul National University, Seoul 151-921, Korea, 5Department of Medical Biotechnology, Dongguk University, Seoul 100-715, Korea, 6These authors contributed equally to this work.

Received: December 5, 2013; Revised: February 21, 2013; Accepted: March 6, 2013

Abstract

The structural flexibility of RNA interference (RNAi)-trig-gering nucleic acids suggests that the design of uncon-ventional RNAi trigger structures with novel features is possible. Here, we report a cross-shaped RNA duplex structure, termed quadruple interfering RNA (qiRNA), with multiple target gene silencing activity. qiRNA trig-gers the simultaneous down-regulation of four cellular target genes via an RNAi mechanism. In addition, qiRNA shows enhanced intracellular delivery and target gene silencing over conventional siRNA when complexed with jetPEI, a linear polyethyleneimine (PEI). We also show that the long antisense strand of qiRNA is incorporated intact into an RNA-induced silencing complex (RISC). This novel RNA scaffold further expands the repertoire of RNAi-triggering molecular structures and could be used in the development of therapeutics for various diseases including viral infections and cancer.

Keywords polyethyleneimine (PEI), quadruple interfering RNA (qiRNA), RNA interference, small interfering RNA (siRNA)

Article

Research Article

Mol. Cells 2013; 35(4): 320-326

Published online April 30, 2013 https://doi.org/10.1007/s10059-013-2316-7

Copyright © The Korean Society for Molecular and Cellular Biology.

RNA Interference-Mediated Simultaneous Silencing of Four Genes Using Cross-Shaped RNA

Tae Yeon Lee, Chan Il Chang, Dooyoung Lee, Sun Woo Hong, Chanseok Shin4, Chiang J. Li, Soyoun Kim, Dirk Haussecker, and Dong-ki Lee

1Global Research Laboratory for RNAi Medicine, Department of Chemistry, Sungkyunkwan University, Suwon 440-746, Korea, 2Skip Acker-man Center for Molecular Therapeutics, Beth Israel Deconness Medical Center, Harvard Medical School, Boston, USA, 3BMT Inc., Seoul 153-777, Korea, 4Depart-ment of Agricultural Biotechnology, Seoul National University, Seoul 151-921, Korea, 5Department of Medical Biotechnology, Dongguk University, Seoul 100-715, Korea, 6These authors contributed equally to this work.

Received: December 5, 2013; Revised: February 21, 2013; Accepted: March 6, 2013

Abstract

The structural flexibility of RNA interference (RNAi)-trig-gering nucleic acids suggests that the design of uncon-ventional RNAi trigger structures with novel features is possible. Here, we report a cross-shaped RNA duplex structure, termed quadruple interfering RNA (qiRNA), with multiple target gene silencing activity. qiRNA trig-gers the simultaneous down-regulation of four cellular target genes via an RNAi mechanism. In addition, qiRNA shows enhanced intracellular delivery and target gene silencing over conventional siRNA when complexed with jetPEI, a linear polyethyleneimine (PEI). We also show that the long antisense strand of qiRNA is incorporated intact into an RNA-induced silencing complex (RISC). This novel RNA scaffold further expands the repertoire of RNAi-triggering molecular structures and could be used in the development of therapeutics for various diseases including viral infections and cancer.

Keywords: polyethyleneimine (PEI), quadruple interfering RNA (qiRNA), RNA interference, small interfering RNA (siRNA)

Mol. Cells
Mar 31, 2023 Vol.46 No.3, pp. 131~189
COVER PICTURE
The physiologically important cytoprotective signaling in normal cells (background area in turquoise) mediated by NRF2 (blue chain) is often hijacked by cancer cells (red ball) in the tumor microenvironment (yellow area). However, the differential roles of NRF2 throughout the multistage carcinogenesis remains largely unresolved (white-colored overlapping misty areas).

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