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Mol. Cells

Published online February 28, 2023

© The Korean Society for Molecular and Cellular Biology

Homogeneity of XEN Cells Is Critical for Generation of Chemically Induced Pluripotent Stem Cells

Dahee Jeong1,2,6 , Yukyeong Lee1,2,6 , Seung-Won Lee1,2 , Seokbeom Ham1,2 , Minseong Lee1,2 , Na Young Choi1,2 , Guangming Wu3,4 , Hans R. Scholer4 , and Kinarm Ko1,2,5,*

1Department of Stem Cell Biology, School of Medicine, Konkuk University, Seoul 05029, Korea, 2Center for Stem Cell Research, Institute of Advanced Biomedical Science, Konkuk University, Seoul 05029, Korea, 2Guangzhou Regenerative Medicine and Health Guangdong Laboratory, Guangzhou 510320, China, 4Department of Cell and Developmental Biology, Max Planck Institute for Molecular Biomedicine, Münster 48149, Germany, 5Research Institute of Medical Science, Konkuk University, Seoul 05029, Korea, 6These authors contributed equally to this work.

Correspondence to : knko@kku.ac.kr

Received: August 18, 2022; Revised: October 22, 2022; Accepted: October 23, 2022

This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/3.0/.

Abstract

In induced pluripotent stem cells (iPSCs), pluripotency is induced artificially by introducing the transcription factors Oct4, Sox2, Klf4, and c-Myc. When a transgene is introduced using a viral vector, the transgene may be integrated into the host genome and cause a mutation and cancer. No integration occurs when an episomal vector is used, but this method has a limitation in that remnants of the virus or vector remain in the cell, which limits the use of such iPSCs in therapeutic applications. Chemical reprogramming, which relies on treatment with small-molecule compounds to induce pluripotency, can overcome this problem. In this method, reprogramming is induced according to the gene expression pattern of extra-embryonic endoderm (XEN) cells, which are used as an intermediate stage in pluripotency induction. Therefore, iPSCs can be induced only from established XEN cells. We induced XEN cells using small molecules that modulate a signaling pathway and affect epigenetic modifications, and devised a culture method in which can be produced homogeneous XEN cells. At least 4 passages were required to establish morphologically homogeneous chemically induced XEN (CiXEN) cells, whose properties were similar to those of XEN cells, as revealed through cellular and molecular characterization. Chemically iPSCs derived from CiXEN cells showed characteristics similar to those of mouse embryonic stem cells. Our results show that the homogeneity of CiXEN cells is critical for the efficient induction of pluripotency by chemicals.

Keywords chemical reprogramming, chemically induced pluripotent stem cells, extra-embryonic endoderm, extra-embryonic endoderm cells, reprogramming

Article

On-line First

Mol. Cells

Published online February 28, 2023

Copyright © The Korean Society for Molecular and Cellular Biology.

Homogeneity of XEN Cells Is Critical for Generation of Chemically Induced Pluripotent Stem Cells

Dahee Jeong1,2,6 , Yukyeong Lee1,2,6 , Seung-Won Lee1,2 , Seokbeom Ham1,2 , Minseong Lee1,2 , Na Young Choi1,2 , Guangming Wu3,4 , Hans R. Scholer4 , and Kinarm Ko1,2,5,*

1Department of Stem Cell Biology, School of Medicine, Konkuk University, Seoul 05029, Korea, 2Center for Stem Cell Research, Institute of Advanced Biomedical Science, Konkuk University, Seoul 05029, Korea, 2Guangzhou Regenerative Medicine and Health Guangdong Laboratory, Guangzhou 510320, China, 4Department of Cell and Developmental Biology, Max Planck Institute for Molecular Biomedicine, Münster 48149, Germany, 5Research Institute of Medical Science, Konkuk University, Seoul 05029, Korea, 6These authors contributed equally to this work.

Correspondence to:knko@kku.ac.kr

Received: August 18, 2022; Revised: October 22, 2022; Accepted: October 23, 2022

This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/3.0/.

Abstract

In induced pluripotent stem cells (iPSCs), pluripotency is induced artificially by introducing the transcription factors Oct4, Sox2, Klf4, and c-Myc. When a transgene is introduced using a viral vector, the transgene may be integrated into the host genome and cause a mutation and cancer. No integration occurs when an episomal vector is used, but this method has a limitation in that remnants of the virus or vector remain in the cell, which limits the use of such iPSCs in therapeutic applications. Chemical reprogramming, which relies on treatment with small-molecule compounds to induce pluripotency, can overcome this problem. In this method, reprogramming is induced according to the gene expression pattern of extra-embryonic endoderm (XEN) cells, which are used as an intermediate stage in pluripotency induction. Therefore, iPSCs can be induced only from established XEN cells. We induced XEN cells using small molecules that modulate a signaling pathway and affect epigenetic modifications, and devised a culture method in which can be produced homogeneous XEN cells. At least 4 passages were required to establish morphologically homogeneous chemically induced XEN (CiXEN) cells, whose properties were similar to those of XEN cells, as revealed through cellular and molecular characterization. Chemically iPSCs derived from CiXEN cells showed characteristics similar to those of mouse embryonic stem cells. Our results show that the homogeneity of CiXEN cells is critical for the efficient induction of pluripotency by chemicals.

Keywords: chemical reprogramming, chemically induced pluripotent stem cells, extra-embryonic endoderm, extra-embryonic endoderm cells, reprogramming

Mol. Cells
Feb 28, 2023 Vol.46 No.2, pp. 69~129
COVER PICTURE
The bulk tissue is a heterogeneous mixture of various cell types, which is depicted as a skein of intertwined threads with diverse colors each of which represents a unique cell type. Single-cell omics analysis untangles efficiently the skein according to the color by providing information of molecules at individual cells and interpretation of such information based on different cell types. The molecules that can be profiled at the individual cell by single-cell omics analysis includes DNA (bottom middle), RNA (bottom right), and protein (bottom left). This special issue reviews single-cell technologies and computational methods that have been developed for the single-cell omics analysis and how they have been applied to improve our understanding of the underlying mechanisms of biological and pathological phenomena at the single-cell level.

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