Mol. Cells 2022; 45(9): 649-659
Published online August 29, 2022
https://doi.org/10.14348/molcells.2022.0073
© The Korean Society for Molecular and Cellular Biology
Correspondence to : liujian509@hfut.edu.cn (JL); 2020800035@hfut.edu.cn (YL)
This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/3.0/.
A long-term energy nutritional imbalance fundamentally causes the development of obesity and associated fat accumulation. Lysosomes, as nutrient-sensing and lipophagy centers, critically control cellular lipid catabolism in response to nutrient deprivation. However, whether lysosome activity is directly involved in nutrient-induced fat accumulation remains unclear. In this study, worm fat accumulation was induced by 1 mM glucose or 0.02 mM palmitic acid supplementation. Along with the elevation of fat accumulation, lysosomal number and acidification were also increased, suggesting that lysosome activity might be correlated with nutrient-induced fat deposition in Caenorhabditis elegans. Furthermore, treatments with the lysosomal inhibitors chloroquine and leupeptin significantly reduced basal and nutrient-induced fat accumulation in C. elegans. The knockdown of hlh-30, which is a critical gene in lysosomal biogenesis, also resulted in worm fat loss. Finally, the mutation of aak-2, daf-15, and rsks-1 showed that mTORC1 (mechanistic target of rapamycin complex-1) signaling mediated the effects of lysosomes on basal and nutrient-induced fat accumulation in C. elegans. Overall, this study reveals the previously undescribed role of lysosomes in overnutrition sensing, suggesting a new strategy for controlling body fat accumulation.
Keywords Caenorhabditis elegans, fat accumulation, lysosome, nutrient
Obesity, characterized by excessive body fat accumulation, has become a worldwide epidemic disease and is closely related to many common metabolic comorbidities, such as type 2 diabetes, fatty liver, cardiovascular disease, neurodegenerative disorders, and even certain cancers (Afshin et al., 2017; Hotamisligil, 2006). A long-term energy nutritional imbalance fundamentally causes the development of obesity and associated fat accumulation (Hotamisligil, 2006). Thus, investigating critical modulators and signals involved in nutrient-induced fat accumulation may provide a valuable approach to combat obesity and metabolic diseases.
Lysosomes are highly acidic organelles and contain various hydrolases, which are responsible for catabolite recycling and macromolecular degradation. In addition to acting as a center of degradation and recycling (Bainton, 1981), lysosomes have been reported to play an important role in various cellular events, such as autophagy, energy metabolism, cell death, and aging (Carmona-Gutierrez et al., 2016). Recently, it has been well established that lysosomes integrate nutritional information, activate lysosomal-nuclear signaling and orchestrate homeostatic responses in cellular catabolism in mammals (Ballabio and Bonifacino, 2020; Mony et al., 2016). When nutrients are scarce, liver kinase B1 (LKB1) is recruited to the lysosomal membrane to activate AMP-activated protein kinase (AMPK), a core sensor of cellular energy and nutrient status. Lysosomal LKB1 also leads to mechanistic target of rapamycin complex-1 (mTORC1) translocation from the lysosomal membrane and inactivation (Zhang et al., 2014), subsequently promoting the nuclear translocation of transcription factor EB (TFEB) from the cytoplasm (Sancak et al., 2008; Settembre et al., 2013a). Furthermore, intranuclear TFEB regulates lysosome-autophagosome biogenesis and controls lipid catabolism (Sancak et al., 2008; Settembre et al., 2013a). Thus, lysosomes are critically involved in lipid catabolism in response to nutrient deprivation as a transshipment station of nutrient sensors and lipophagy executors (O'Rourke and Ruvkun, 2013; Sancak et al., 2010). Additionally, some studies also suggest that lysosomes may be implicated in adipogenesis and fat accumulation. Genetic deficiency of Lamp-2 (lysosome-associated membrane protein-2) or adipocyte-specific knockout of ATG7 (autophagy-related protein 7) inhibits lysosome-associated autophagy and protects mice against diet-induced obesity and body fat accumulation (Singh et al., 2009; Yasuda-Yamahara et al., 2015). During adipogenesis of human adipose-derived stem cells, a multiplex
As a classical animal model,
By supplementation with glucose and palmitic acid in nematode growth medium (NGM), we previously established a nutrient-induced fat accumulation model in
Worm strains, including N2,
Unless specifically noted, worms were fed on NGM plates with
To inhibit lysosome activity in
The developmental rate was observed as described (MacNeil et al., 2013) with minor modifications. After synchronization, the L1 larvae were transferred to NGM plates and incubated at 20°C. After 50 h, the proportions of L4 larva, adult and gravid adult worms were visually counted based on the development of the vulva. Three independent repeats were performed in each experiment, and thirty animals were measured for each repeat.
The quantification of lysosomal tubule length and NUC-1::pHTomato intensity was performed as described (Sun et al., 2020) with minor modifications. For quantification, Day 1 adult worms expressing NUC-1::CHERRY or P
Approximately 5,000 Day 1 adult worms were washed with M9 buffer and lysed using RIPA lysis buffer. Equal amounts of samples were separated by SDS-PAGE and transferred to PVDF membranes (Millipore, USA). Immunoblot analysis was performed with the corresponding primary and secondary antibodies, including anti-β-actin antibody, rabbit monoclonal antibody (SAB5500001, 1:1,000; Sigma-Aldrich, USA), rabbit anti-CPL-1 antibody (1:5,000) (Lin et al., 2019), and goat anti-rabbit IgG (H+L) secondary antibody (BA1054, 1:5,000; Boster Biological Technology, USA). The band intensities of mature CPL-1 were quantified by dividing the mature CPL-1 band intensity by the sum of the intensities of the pro- and mature CPL-1 bands. Three independent experiments were performed and quantified for each strain.
Oil Red O staining was performed as we previously described (Lin et al., 2019). Briefly, 0.5% Oil Red O was dissolved in 1,2-propanediol and filtered through a 0.22 μm syringe filter before staining. For Oil Red O staining, Day 1 adult worms were washed down from NGM plates with M9 buffer, fixed with 0.5% paraformaldehyde, and frozen at –80°C. After thawing and refreezing three times, the worms were washed with cold M9 buffer, dehydrated in 1,2-propanediol and stained with Oil Red O solution. The stained worms were successively washed with 85% 1,2-propanediol and phosphate-buffered saline and mounted on a 2% agarose slide for imaging.
The quantification of Oil Red O staining was conducted as previously reported (O'Rourke et al., 2009) with minor modifications. Oil Red O was quantified by the excess intensity in the red channel compared to the green and blue channels from the original images using Image-Pro Plus 6.0 software (Media Cybernetics). Then, the area of these positive regions was normalized to the area of the stained worm regions. Thirty animals were measured for each condition. Three independent repeats were performed for each experiment.
LysoTracker Green staining was conducted as described (Hermann et al., 2005) with minor modifications. Briefly, LysoTracker Green DND-26 (Invitrogen, USA) was added to NGM plates at a final concentration of 1 μM, and then, the plates were kept in the dark for 12 h. L1 worms were seeded onto the plates and kept in the dark for approximately 2 days at 20°C. The Day 1 adult worms were narcotized with 50 μM levamisole for 20 min at room temperature, transformed onto a 2% agarose pad and imaged under a fluorescence microscope. For fluorescence quantification, at least 30 worms were imaged with a Nikon ECLIPSE E600 fluorescence microscope and qualified using Image-Pro Plus 6.0 software (Media Cybernetics) as the level of fluorescence intensity.
RNAi-mediated inactivation of
Data are presented as the mean ± SEM. As indicated in the figure legends, unpaired Student’s
To induce
Lysosomes are dynamic organelles that respond to different physiological states. Along with aging of
Furthermore, to affirm whether the increased lysosome number and acidification are accompanied by increased degradation activity, we analyzed the processing alteration of CPL-1, which could be degraded to the active mature form in lysosomes through pro-peptide proteolysis (Stoka et al., 2016; Sun et al., 2020). Western blotting indicated that nutrient supplementation significantly increased the mature CPL-1 levels in the worms (Figs. 1F and 1G).
Finally, we analyzed the correlations between Oil Red O staining and the lysosomal phenotypes, including the length of lysosomal tubules (Supplementary Fig. S3A), the number of vesicular lysosomes (Supplementary Fig. S3B), the average intensity of pHTomato (Supplementary Fig. S3C), LysoTracker Green staining (Supplementary Fig. S3D), LMP-1::GFP expression (Supplementary Fig. S3E), and the percentage of mature CPL-1 (Supplementary Fig. S3F) with Kappa analysis. The data collectively reveal that nutrient supplementation increased lysosomal number, acidification, and activity in
To explore the causal relationship between fat accumulation and lysosomal phenotype alteration, we used the lysosomal inhibitor chloroquine to inhibit lysosomal acidification and lipase activity (Xu et al., 2013) or leupeptin to inhibit the function of lysosomal proteases (Hausott et al., 2012). Chloroquine or leupeptin treatments did not affect physiological parameters or development rates in the worms (Supplementary Table S1). However, their treatments significantly reduced the length of lysosomal tubules and the number of vesicular lysosomes and even abolished the effects of nutrient supplementation on worm lysosome number and morphology in
As a mammalian TFEB homolog, HLH-30 responds to the cellular nutrient status and critically regulates the transcription of genes implicated in lysosome biogenesis and lipid metabolism (Lapierre et al., 2013; O'Rourke and Ruvkun, 2013; Settembre et al., 2013a). Therefore, the deficiency of HLH-30 should lead to similar phenotype alterations to the treatments of lysosomal inhibitors. To test this hypothesis, we performed RNAi-mediated inactivation of
In
In addition to the well-recognized function as the recycling center for nutrient generation, lysosomes also play an important role in extracellular nutrient sensing and intracellular energy monitoring (Appelqvist et al., 2013; Mony et al., 2016; Settembre et al., 2013b). Thus, it is crucial to understand the role of lysosomes in body fat storage or loss. In this study, by utilizing a
In mammalian cells, as a multiprotein complex, mTORC1 localizes to the lysosome, regulates the phosphorylation of ribosomal protein S6 kinase (S6K) and hence controls the biosynthesis of lipids and nucleotides, ribosome biogenesis and glucose metabolism (Kim et al., 2013; Lawrence and Zoncu, 2019). Raptor has been identified as a mTORC1 binding partner, and its binding to mTORC1 is necessary for the mTORC1-catalyzed phosphorylation of S6K (Hara et al., 2002). In
Recent studies have revealed that similar to mammalian TFEB,
In mammalian cells, AMPK is another major regulator that acts antagonistically with mTORC1 and maintains energy and nutrient homeostasis in response to energy availability (Carroll and Dunlop, 2017; Lin and Hardie, 2018). The lysosome has been regarded as the critical site where AMPK acts in opposition to mTORC1 (Lin and Hardie, 2018). When cellular nutrient levels are low, AMPK is activated to inhibit mTORC1 through two distinct mechanisms, including phosphorylation and activation of TSC2 (tuberous sclerosis complex 2), which is a negative regulator of mTORC1 (Inoki et al., 2003), and phosphorylation and inhibition of Raptor (Gwinn et al., 2008). In
In
In conclusion, lysosomes have been well characterized to play a critical role in nutrient sensing of mammalian cells in response to nutrient deprivation and refeeding (Lamming and Bar-Peled, 2019; Lawrence and Zoncu, 2019; Settembre et al., 2013b). In this study, utilizing
We thank Professor Liu, Pingsheng (State Key Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences) for providing the LIU1 strain and Professor Xiaochen Wang (National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences) for providing
R.L., Y.L., and J.L. conceived and designed the experiments. R.L. and Y.L. performed the experiments. R.L., Y.L., J.C., F.W., and L.W. analyzed the data. R.L., Y.L., and J.L. wrote the manuscript. All authors read and approved the final manuscript.
The authors have no potential conflicts of interest to disclose.
Mol. Cells 2022; 45(9): 649-659
Published online September 30, 2022 https://doi.org/10.14348/molcells.2022.0073
Copyright © The Korean Society for Molecular and Cellular Biology.
Rui Lu1 , Juan Chen1
, Fangbin Wang1
, Lu Wang1
, Jian Liu1,2,*
, and Yan Lin1,*
1School of Food and Biological Engineering, Hefei University of Technology, Hefei 230009, China, 2Engineering Research Center of Bioprocess, Ministry of Education, Hefei University of Technology, Hefei 230009, China
Correspondence to:liujian509@hfut.edu.cn (JL); 2020800035@hfut.edu.cn (YL)
This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/3.0/.
A long-term energy nutritional imbalance fundamentally causes the development of obesity and associated fat accumulation. Lysosomes, as nutrient-sensing and lipophagy centers, critically control cellular lipid catabolism in response to nutrient deprivation. However, whether lysosome activity is directly involved in nutrient-induced fat accumulation remains unclear. In this study, worm fat accumulation was induced by 1 mM glucose or 0.02 mM palmitic acid supplementation. Along with the elevation of fat accumulation, lysosomal number and acidification were also increased, suggesting that lysosome activity might be correlated with nutrient-induced fat deposition in Caenorhabditis elegans. Furthermore, treatments with the lysosomal inhibitors chloroquine and leupeptin significantly reduced basal and nutrient-induced fat accumulation in C. elegans. The knockdown of hlh-30, which is a critical gene in lysosomal biogenesis, also resulted in worm fat loss. Finally, the mutation of aak-2, daf-15, and rsks-1 showed that mTORC1 (mechanistic target of rapamycin complex-1) signaling mediated the effects of lysosomes on basal and nutrient-induced fat accumulation in C. elegans. Overall, this study reveals the previously undescribed role of lysosomes in overnutrition sensing, suggesting a new strategy for controlling body fat accumulation.
Keywords: Caenorhabditis elegans, fat accumulation, lysosome, nutrient
Obesity, characterized by excessive body fat accumulation, has become a worldwide epidemic disease and is closely related to many common metabolic comorbidities, such as type 2 diabetes, fatty liver, cardiovascular disease, neurodegenerative disorders, and even certain cancers (Afshin et al., 2017; Hotamisligil, 2006). A long-term energy nutritional imbalance fundamentally causes the development of obesity and associated fat accumulation (Hotamisligil, 2006). Thus, investigating critical modulators and signals involved in nutrient-induced fat accumulation may provide a valuable approach to combat obesity and metabolic diseases.
Lysosomes are highly acidic organelles and contain various hydrolases, which are responsible for catabolite recycling and macromolecular degradation. In addition to acting as a center of degradation and recycling (Bainton, 1981), lysosomes have been reported to play an important role in various cellular events, such as autophagy, energy metabolism, cell death, and aging (Carmona-Gutierrez et al., 2016). Recently, it has been well established that lysosomes integrate nutritional information, activate lysosomal-nuclear signaling and orchestrate homeostatic responses in cellular catabolism in mammals (Ballabio and Bonifacino, 2020; Mony et al., 2016). When nutrients are scarce, liver kinase B1 (LKB1) is recruited to the lysosomal membrane to activate AMP-activated protein kinase (AMPK), a core sensor of cellular energy and nutrient status. Lysosomal LKB1 also leads to mechanistic target of rapamycin complex-1 (mTORC1) translocation from the lysosomal membrane and inactivation (Zhang et al., 2014), subsequently promoting the nuclear translocation of transcription factor EB (TFEB) from the cytoplasm (Sancak et al., 2008; Settembre et al., 2013a). Furthermore, intranuclear TFEB regulates lysosome-autophagosome biogenesis and controls lipid catabolism (Sancak et al., 2008; Settembre et al., 2013a). Thus, lysosomes are critically involved in lipid catabolism in response to nutrient deprivation as a transshipment station of nutrient sensors and lipophagy executors (O'Rourke and Ruvkun, 2013; Sancak et al., 2010). Additionally, some studies also suggest that lysosomes may be implicated in adipogenesis and fat accumulation. Genetic deficiency of Lamp-2 (lysosome-associated membrane protein-2) or adipocyte-specific knockout of ATG7 (autophagy-related protein 7) inhibits lysosome-associated autophagy and protects mice against diet-induced obesity and body fat accumulation (Singh et al., 2009; Yasuda-Yamahara et al., 2015). During adipogenesis of human adipose-derived stem cells, a multiplex
As a classical animal model,
By supplementation with glucose and palmitic acid in nematode growth medium (NGM), we previously established a nutrient-induced fat accumulation model in
Worm strains, including N2,
Unless specifically noted, worms were fed on NGM plates with
To inhibit lysosome activity in
The developmental rate was observed as described (MacNeil et al., 2013) with minor modifications. After synchronization, the L1 larvae were transferred to NGM plates and incubated at 20°C. After 50 h, the proportions of L4 larva, adult and gravid adult worms were visually counted based on the development of the vulva. Three independent repeats were performed in each experiment, and thirty animals were measured for each repeat.
The quantification of lysosomal tubule length and NUC-1::pHTomato intensity was performed as described (Sun et al., 2020) with minor modifications. For quantification, Day 1 adult worms expressing NUC-1::CHERRY or P
Approximately 5,000 Day 1 adult worms were washed with M9 buffer and lysed using RIPA lysis buffer. Equal amounts of samples were separated by SDS-PAGE and transferred to PVDF membranes (Millipore, USA). Immunoblot analysis was performed with the corresponding primary and secondary antibodies, including anti-β-actin antibody, rabbit monoclonal antibody (SAB5500001, 1:1,000; Sigma-Aldrich, USA), rabbit anti-CPL-1 antibody (1:5,000) (Lin et al., 2019), and goat anti-rabbit IgG (H+L) secondary antibody (BA1054, 1:5,000; Boster Biological Technology, USA). The band intensities of mature CPL-1 were quantified by dividing the mature CPL-1 band intensity by the sum of the intensities of the pro- and mature CPL-1 bands. Three independent experiments were performed and quantified for each strain.
Oil Red O staining was performed as we previously described (Lin et al., 2019). Briefly, 0.5% Oil Red O was dissolved in 1,2-propanediol and filtered through a 0.22 μm syringe filter before staining. For Oil Red O staining, Day 1 adult worms were washed down from NGM plates with M9 buffer, fixed with 0.5% paraformaldehyde, and frozen at –80°C. After thawing and refreezing three times, the worms were washed with cold M9 buffer, dehydrated in 1,2-propanediol and stained with Oil Red O solution. The stained worms were successively washed with 85% 1,2-propanediol and phosphate-buffered saline and mounted on a 2% agarose slide for imaging.
The quantification of Oil Red O staining was conducted as previously reported (O'Rourke et al., 2009) with minor modifications. Oil Red O was quantified by the excess intensity in the red channel compared to the green and blue channels from the original images using Image-Pro Plus 6.0 software (Media Cybernetics). Then, the area of these positive regions was normalized to the area of the stained worm regions. Thirty animals were measured for each condition. Three independent repeats were performed for each experiment.
LysoTracker Green staining was conducted as described (Hermann et al., 2005) with minor modifications. Briefly, LysoTracker Green DND-26 (Invitrogen, USA) was added to NGM plates at a final concentration of 1 μM, and then, the plates were kept in the dark for 12 h. L1 worms were seeded onto the plates and kept in the dark for approximately 2 days at 20°C. The Day 1 adult worms were narcotized with 50 μM levamisole for 20 min at room temperature, transformed onto a 2% agarose pad and imaged under a fluorescence microscope. For fluorescence quantification, at least 30 worms were imaged with a Nikon ECLIPSE E600 fluorescence microscope and qualified using Image-Pro Plus 6.0 software (Media Cybernetics) as the level of fluorescence intensity.
RNAi-mediated inactivation of
Data are presented as the mean ± SEM. As indicated in the figure legends, unpaired Student’s
To induce
Lysosomes are dynamic organelles that respond to different physiological states. Along with aging of
Furthermore, to affirm whether the increased lysosome number and acidification are accompanied by increased degradation activity, we analyzed the processing alteration of CPL-1, which could be degraded to the active mature form in lysosomes through pro-peptide proteolysis (Stoka et al., 2016; Sun et al., 2020). Western blotting indicated that nutrient supplementation significantly increased the mature CPL-1 levels in the worms (Figs. 1F and 1G).
Finally, we analyzed the correlations between Oil Red O staining and the lysosomal phenotypes, including the length of lysosomal tubules (Supplementary Fig. S3A), the number of vesicular lysosomes (Supplementary Fig. S3B), the average intensity of pHTomato (Supplementary Fig. S3C), LysoTracker Green staining (Supplementary Fig. S3D), LMP-1::GFP expression (Supplementary Fig. S3E), and the percentage of mature CPL-1 (Supplementary Fig. S3F) with Kappa analysis. The data collectively reveal that nutrient supplementation increased lysosomal number, acidification, and activity in
To explore the causal relationship between fat accumulation and lysosomal phenotype alteration, we used the lysosomal inhibitor chloroquine to inhibit lysosomal acidification and lipase activity (Xu et al., 2013) or leupeptin to inhibit the function of lysosomal proteases (Hausott et al., 2012). Chloroquine or leupeptin treatments did not affect physiological parameters or development rates in the worms (Supplementary Table S1). However, their treatments significantly reduced the length of lysosomal tubules and the number of vesicular lysosomes and even abolished the effects of nutrient supplementation on worm lysosome number and morphology in
As a mammalian TFEB homolog, HLH-30 responds to the cellular nutrient status and critically regulates the transcription of genes implicated in lysosome biogenesis and lipid metabolism (Lapierre et al., 2013; O'Rourke and Ruvkun, 2013; Settembre et al., 2013a). Therefore, the deficiency of HLH-30 should lead to similar phenotype alterations to the treatments of lysosomal inhibitors. To test this hypothesis, we performed RNAi-mediated inactivation of
In
In addition to the well-recognized function as the recycling center for nutrient generation, lysosomes also play an important role in extracellular nutrient sensing and intracellular energy monitoring (Appelqvist et al., 2013; Mony et al., 2016; Settembre et al., 2013b). Thus, it is crucial to understand the role of lysosomes in body fat storage or loss. In this study, by utilizing a
In mammalian cells, as a multiprotein complex, mTORC1 localizes to the lysosome, regulates the phosphorylation of ribosomal protein S6 kinase (S6K) and hence controls the biosynthesis of lipids and nucleotides, ribosome biogenesis and glucose metabolism (Kim et al., 2013; Lawrence and Zoncu, 2019). Raptor has been identified as a mTORC1 binding partner, and its binding to mTORC1 is necessary for the mTORC1-catalyzed phosphorylation of S6K (Hara et al., 2002). In
Recent studies have revealed that similar to mammalian TFEB,
In mammalian cells, AMPK is another major regulator that acts antagonistically with mTORC1 and maintains energy and nutrient homeostasis in response to energy availability (Carroll and Dunlop, 2017; Lin and Hardie, 2018). The lysosome has been regarded as the critical site where AMPK acts in opposition to mTORC1 (Lin and Hardie, 2018). When cellular nutrient levels are low, AMPK is activated to inhibit mTORC1 through two distinct mechanisms, including phosphorylation and activation of TSC2 (tuberous sclerosis complex 2), which is a negative regulator of mTORC1 (Inoki et al., 2003), and phosphorylation and inhibition of Raptor (Gwinn et al., 2008). In
In
In conclusion, lysosomes have been well characterized to play a critical role in nutrient sensing of mammalian cells in response to nutrient deprivation and refeeding (Lamming and Bar-Peled, 2019; Lawrence and Zoncu, 2019; Settembre et al., 2013b). In this study, utilizing
We thank Professor Liu, Pingsheng (State Key Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences) for providing the LIU1 strain and Professor Xiaochen Wang (National Laboratory of Biomacromolecules, CAS Center for Excellence in Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences) for providing
R.L., Y.L., and J.L. conceived and designed the experiments. R.L. and Y.L. performed the experiments. R.L., Y.L., J.C., F.W., and L.W. analyzed the data. R.L., Y.L., and J.L. wrote the manuscript. All authors read and approved the final manuscript.
The authors have no potential conflicts of interest to disclose.
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