Molecules and Cells

Cited by CrossRef (83)

  1. Jianzhong Hu, Jing Cai, Su Jung Park, Kwanuk Lee, Yuxia Li, Yao Chen, Jae‐Young Yun, Tao Xu, Hunseung Kang. N6‐Methyladenosine mRNA methylation is important for salt stress tolerance in Arabidopsis. The Plant Journal 2021;106:1759
  2. Muthusamy Muthusamy, Jong-Hee Kim, Jin A Kim, Soo-In Lee. Plant RNA Binding Proteins as Critical Modulators in Drought, High Salinity, Heat, and Cold Stress Responses: An Updated Overview. IJMS 2021;22:6731
  3. Vivek K. Maurya, Sunil K. Gupta, Marisha Sharma, Baisakhi Majumder, Farah Deeba, Nalini Pandey, Vivek Pandey. Growth, physiological and proteomic responses in field grown wheat varieties exposed to elevated CO2 under high ambient ozone. Physiol Mol Biol Plants 2020;26:1437
  4. Gul Nawaz, Babar Usman, Haowen Peng, Neng Zhao, Ruizhi Yuan, Yaoguang Liu, Rongbai Li. Knockout of Pi21 by CRISPR/Cas9 and iTRAQ-Based Proteomic Analysis of Mutants Revealed New Insights into M. oryzae Resistance in Elite Rice Line. Genes 2020;11:735
  5. Le Nguyen Tieu Ngoc, Su Jung Park, Jing Cai, Trinh Thi Huong, Kwanuk Lee, Hunseung Kang. RsmD, a Chloroplast rRNA m2G Methyltransferase, Plays a Role in Cold Stress Tolerance by Possibly Affecting Chloroplast Translation in Arabidopsis . 2021;62:948
  6. Marcel Bach-Pages, Alfredo Castello, Gail M. Preston. Plant RNA Interactome Capture: Revealing the Plant RBPome. Trends in Plant Science 2017;22:449
  7. Victor Muleya, Claudius Marondedze. Functional Roles of RNA-Binding Proteins in Plant Signaling. Life 2020;10:288
  8. Kentaro Nakaminami, Motoaki Seki. Survival Strategies in Extreme Cold and Desiccation. 2020.
  9. Richard J Morris. On the selectivity, specificity and signalling potential of the long-distance movement of messenger RNA. Current Opinion in Plant Biology 2018;43:1
  10. Ghazala Nawaz, Than Zaw Tun Sai, Kwanuk Lee, Yeon-Ok Kim, Hunseung Kang. Rice DEAD-box RNA helicase OsRH53 has negative impact on Arabidopsis response to abiotic stresses. Plant Growth Regul 2018;85:153
  11. Naiqi Wang, Anthony A. Millar. RNA-Based Technologies for Functional Genomics in Plants. 2018.
  12. Yasira Shoaib, Jianzhong Hu, Stefano Manduzio, Hunseung Kang. Alpha‐ketoglutarate‐dependent dioxygenase homolog 10B, an N6‐methyladenosine mRNA demethylase, plays a role in salt stress and abscisic acid responses in Arabidopsis thaliana. Physiologia Plantarum 2021;173:1078
  13. Yanyan Yan, Jianghuang Gan, Yilin Tao, Thomas W. Okita, Li Tian. RNA-Binding Proteins: The Key Modulator in Stress Granule Formation and Abiotic Stress Response. Front. Plant Sci. 2022;13
  14. Yun Jia, Mi-Li Liu, Ming Yue, Zhe Zhao, Gui-Fang Zhao, Zhong-Hu Li. Comparative Transcriptome Analysis Reveals Adaptive Evolution of Notopterygium incisum and Notopterygium franchetii, Two High-Alpine Herbal Species Endemic to China. Molecules 2017;22:1158
  15. Wil Prall, Bishwas Sharma, Brian D Gregory. Transcription Is Just the Beginning of Gene Expression Regulation: The Functional Significance of RNA-Binding Proteins to Post-transcriptional Processes in Plants. 2019;60:1939
  16. Sufian Suliman, Admas Alemu, Awadalla Abdalla Abdelmula, Ghazi Hamid Badawi, Ayed Al-Abdallat, Wuletaw Tadesse. Genome-wide association analysis uncovers stable QTLs for yield and quality traits of spring bread wheat (Triticum aestivum) across contrasting environments. Plant Gene 2021;25:100269
  17. Salika Ramazan, Nelofer Jan, Riffat John. Comparative protein analysis of two maize genotypes with contrasting tolerance to low temperature. BMC Plant Biol 2023;23
  18. Xin Wang, Fang Li, Zhenyuan Chen, Bingxian Yang, Setsuko Komatsu, Shunli Zhou. Proteomic analysis reveals the effects of melatonin on soybean root tips under flooding stress. Journal of Proteomics 2021;232:104064
  19. Ritika Rajpoot, Rajneesh Kumar Srivastava, Anjana Rani, Poonam Pandey, R. S. Dubey. Manganese-induced oxidative stress, ultrastructural changes, and proteomics studies in rice plants. Protoplasma 2021;258:319
  20. Luis Alvarado-Marchena, Joan Marquez-Molins, Mireya Martinez-Perez, Frederic Aparicio, Vicente Pallás. Mapping of Functional Subdomains in the atALKBH9B m6A-Demethylase Required for Its Binding to the Viral RNA and to the Coat Protein of Alfalfa Mosaic Virus. Front. Plant Sci. 2021;12
  21. Kwanuk Lee, Hunseung Kang. Engineering of pentatricopeptide repeat proteins in organellar gene regulation. Front. Plant Sci. 2023;14
  22. Ye Rin Park, Min Ji Choi, Su Jung Park, Hunseung Kang. Three zinc-finger RNA-binding proteins in cabbage (Brassica rapa) play diverse roles in seed germination and plant growth under normal and abiotic stress conditions. Physiol Plantarum 2017;159:93
  23. Kwanuk Lee, Su Jung Park, Youn-Il Park, Hunseung Kang. CFM9, a Mitochondrial CRM Protein, Is Crucial for Mitochondrial Intron Splicing, Mitochondria Function and Arabidopsis Growth and Stress Responses. 2019;60:2538
  24. Junjie Liu, Chunguang Zhang, Xiaochen Jia, Wenxia Wang, Heng Yin. Comparative analysis of RNA-binding proteomes under Arabidopsis thaliana-Pst DC3000-PAMP interaction by orthogonal organic phase separation. International Journal of Biological Macromolecules 2020;160:47
  25. Cristiane Candida do Amaral, Geisa Ferreira Fernandes, Anderson Messias Rodrigues, Eva Burger, Zoilo Pires de Camargo, Monde Ntwasa. Proteomic analysis of Paracoccidioides brasiliensis complex isolates: Correlation of the levels of differentially expressed proteins with in vivo virulence. PLoS ONE 2019;14:e0218013
  26. Weidong Wang, Shuaile Wang, Wan Gong, Luqiong Lv, Liangsheng Xu, Jiajun Nie, Lili Huang. Valsa mali secretes an effector protein VmEP1 to target a K homology domain‐containing protein for virulence in apple. Molecular Plant Pathology 2022;23:1577
  27. Ghazala Nawaz, Kwanuk Lee, Su Jung Park, Yeon-Ok Kim, Hunseung Kang. A chloroplast-targeted cabbage DEAD-box RNA helicase BrRH22 confers abiotic stress tolerance to transgenic Arabidopsis plants by affecting translation of chloroplast transcripts. Plant Physiology and Biochemistry 2018;127:336
  28. Hossein Emami, Frank Kempken. PRECOCIOUS1 (POCO1), a mitochondrial pentatricopeptide repeat protein affects flowering time in Arabidopsis thaliana. The Plant Journal 2019;100:265
  29. Angel J. Matilla. Exploring Breakthroughs in Three Traits Belonging to Seed Life. Plants 2022;11:490
  30. Mst. Sufara Akhter Banu, Kazi Md. Kamrul Huda, Md. Harun-Ur-Rashid, Shahanaz Parveen, S. M. Shahinul Islam, Narendra Tuteja. Phenotypic and microarray analysis reveals salinity stress-induced oxidative tolerance in transgenic rice expressing a DEAD-box RNA helicase, OsDB10. Plant Mol Biol 2023
  31. Lauren K Dedow, Julia Bailey-Serres. Searching for a Match: Structure, Function and Application of Sequence-Specific RNA-Binding Proteins. 2019;60:1927
  32. Aolong Sun, Yongliang Li, Yang He, Xiaoxiao Zou, Fenglin Chen, RuiZhao Ji, Changqiao You, Keyao Yu, You Li, Wenjun Xiao, Xinhong Guo. Comprehensive Genome-Wide Identification, Characterization, and Expression Analysis of CCHC-Type Zinc Finger Gene Family in Wheat (Triticum aestivum L.). Front. Plant Sci. 2022;13
  33. Umme Amara, Yasira Shoaib, Hunseung Kang. ALKBH9C, a potential RNA m6A demethylase, regulates the response of Arabidopsis to abiotic stresses and abscisic acid. Plant Cell & Environment 2022;45:3566
  34. Su Jung Park, Hwa Jung Lee, Kwanuk Lee, Hunseung Kang. A La-Related Protein LaRP6a Delays Flowering of Arabidopsis thaliana by Upregulating FLC Transcript Levels. J. Plant Biol. 2020;63:369
  35. Lijuan Lou, Ling Ding, Tao Wang, Yong Xiang. Emerging Roles of RNA-Binding Proteins in Seed Development and Performance. IJMS 2020;21:6822
  36. Mayank Anand Gururani. Plant RNA-binding proteins as key players in abiotic stress physiology. J Exp Bio & Ag Sci 2023;11:41
  37. Sy Nguyen Dinh, Than Zaw Tun Sai, Ghazala Nawaz, Kwanuk Lee, Hunseung Kang. Abiotic stresses affect differently the intron splicing and expression of chloroplast genes in coffee plants ( Coffea arabica ) and rice ( Oryza sativa ). Journal of Plant Physiology 2016;201:85
  38. Mohammed Albaqami, Anireddy S. N. Reddy. Development of an in vitro pre-mRNA splicing assay using plant nuclear extract. Plant Methods 2018;14
  39. Xiaofei Xue, Fuchao Jiao, Haicheng Xu, Qiqing Jiao, Xin Zhang, Yong Zhang, Shangyi Du, Menghan Xi, Aiguo Wang, Jingtang Chen, Ming Wang. The role of RNA-binding protein, microRNA and alternative splicing in seed germination: a field need to be discovered. BMC Plant Biol 2021;21
  40. Fernanda Salvato, Philip Loziuk, Eduardo Kiyota, Gabriel Silva Daneluzzi, Pedro Araújo, David C. Muddiman, Paulo Mazzafera. Label‐Free Quantitative Proteomics of Enriched Nuclei from Sugarcane (Saccharum ssp) Stems in Response to Drought Stress. Proteomics 2019;19
  41. Kwanuk Lee, Hunseung Kang. Roles of Organellar RNA-Binding Proteins in Plant Growth, Development, and Abiotic Stress Responses. IJMS 2020;21:4548
  42. Shawn W. Foley, Marianne C. Kramer, Brian D. Gregory. RNA structure, binding, and coordination inArabidopsis. WIREs RNA 2017;8:e1426
  43. Sayed Amirreza Tahaei, Mohammad Nasri, Ali Soleymani, Farshad Ghooshchi, Meysam Oveysi. Plant growth regulators affecting corn (Zea mays L.) physiology and rab17 expression under drought conditions. Biocatalysis and Agricultural Biotechnology 2022;41:102288
  44. Julien Rozière, Cécile Guichard, Véronique Brunaud, Marie-Laure Martin, Sylvie Coursol. A comprehensive map of preferentially located motifs reveals distinct proximal cis-regulatory sequences in plants. Front. Plant Sci. 2022;13
  45. Muhammad Haroon, Rabail Afzal, Muhammad Mubashar Zafar, Hongwei Zhang, Lin Li. Ribonomics Approaches to Identify RBPome in Plants and Other Eukaryotes: Current Progress and Future Prospects. IJMS 2022;23:5923
  46. Petra Peharec Štefanić, Petra Cvjetko, Renata Biba, Ana-Marija Domijan, Ilse Letofsky-Papst, Mirta Tkalec, Sandra Šikić, Mario Cindrić, Biljana Balen. Physiological, ultrastructural and proteomic responses of tobacco seedlings exposed to silver nanoparticles and silver nitrate. Chemosphere 2018;209:640
  47. Muhammad Haroon, Hala Tariq, Rabail Afzal, Muhammad Anas, Shanza Nasar, Neha Kainat, Sajid Fiaz, Uswa Irfan, Fahad Idrees, Muhammad Mubashar Zafar. Progress in genome-wide identification of RBPs and their role in mitigating stresses, and growth in plants. South African Journal of Botany 2023;160:132
  48. Dharm Skandh Jain, Sanket Rajan Gupte, Raviprasad Aduri. A Data Driven Model for Predicting RNA-Protein Interactions based on Gradient Boosting Machine. Sci Rep 2018;8
  49. Sangram K. Lenka, Amit K. Singh, Senthilkumar K. Muthusamy, Shuchi Smita, Viswanathan Chinnusamy, Kailash C. Bansal. Heterologous expression of rice RNA-binding glycine-rich (RBG) gene OsRBGD3 in transgenic Arabidopsis thaliana confers cold stress tolerance. Functional Plant Biol. 2019;46:482
  50. Jérémie Bazin, Natali Romero, Richard Rigo, Celine Charon, Thomas Blein, Federico Ariel, Martin Crespi. Nuclear Speckle RNA Binding Proteins Remodel Alternative Splicing and the Non-coding Arabidopsis Transcriptome to Regulate a Cross-Talk Between Auxin and Immune Responses. Front. Plant Sci. 2018;9
  51. Asha Anand, Gopal Pandi. Noncoding RNA: An Insight into Chloroplast and Mitochondrial Gene Expressions. Life 2021;11:49
  52. P. Hima Kumari, K. Venkatesh, S. Krupanidhi, S. Anil Kumar. Molecular Approaches in Plant Biology and Environmental Challenges. 2021.
  53. P. Vidhyasekaran. Plant Innate Immunity Signals and Signaling Systems. 2021.
  54. Tino Köster, Marlene Reichel, Dorothee Staiger. CLIP and RNA interactome studies to unravel genome-wide RNA-protein interactions in vivo in Arabidopsis thaliana. Methods 2020;178:63
  55. Julieta L Mateos, Dorothee Staiger. Toward a systems view on RNA-binding proteins and associated RNAs in plants: Guilt by association. 2023;35:1708
  56. Margaret Scarrow, Yiling Wang, Genlou Sun. Molecular regulatory mechanisms underlying the adaptability of polyploid plants. Biological Reviews 2021;96:394
  57. Gustavo A. Díaz-Cruz, Bryan J. Cassone. A tale of survival: Molecular defense mechanisms of soybean to overcome Soybean mosaic virus infection. Physiological and Molecular Plant Pathology 2018;102:79
  58. Hye-Yeon Seok, Linh Vu Nguyen, Doai Van Nguyen, Sun-Young Lee, Yong-Hwan Moon. Investigation of a Novel Salt Stress-Responsive Pathway Mediated by Arabidopsis DEAD-Box RNA Helicase Gene AtRH17 Using RNA-Seq Analysis. IJMS 2020;21:1595
  59. Charith Raj Adkar-Purushothama, François Bolduc, Pierrick Bru, Jean-Pierre Perreault. Insights Into Potato Spindle Tuber Viroid Quasi-Species From Infection to Disease. Front. Microbiol. 2020;11
  60. Rafaqat A. Gill, Basharat Ali, Su Yang, Chaobo Tong, Faisal Islam, Muhammad Bilal Gill, Theodore M. Mwamba, Skhawat Ali, Bizeng Mao, Shengyi Liu, Weijun Zhou. Reduced Glutathione Mediates Pheno-Ultrastructure, Kinome and Transportome in Chromium-Induced Brassica napus L.. Front. Plant Sci. 2017;8
  61. Mohammad Bakhshian, Mohammad Reza Naderi, Hamid Reza Javanmard, Babak Bahreininejad. The growth of summer savory (Satureja hortensis) affected by fertilization and plant growth regulators in temperature stress. Biocatalysis and Agricultural Biotechnology 2022;43:102371
  62. Anna Ostendorp, Steffen Ostendorp, Yuan Zhou, Zoé Chaudron, Lukas Wolffram, Khadija Rombi, Linn von Pein, Sven Falke, Cy M. Jeffries, Dmitri I. Svergun, Christian Betzel, Richard J. Morris, Friedrich Kragler, Julia Kehr. Intrinsically disordered plant protein PARCL colocalizes with RNA in phase-separated condensates whose formation can be regulated by mutating the PLD. Journal of Biological Chemistry 2022;298:102631
  63. Ghazala Nawaz, Hunseung Kang. Chloroplast- or Mitochondria-Targeted DEAD-Box RNA Helicases Play Essential Roles in Organellar RNA Metabolism and Abiotic Stress Responses. Front. Plant Sci. 2017;8
  64. Peng Zhao, Fang Wang, Na Li, Dong-Qiao Shi, Wei-Cai Yang. Pentatricopeptide repeat protein MID1 modulates nad2 intron 1 splicing and Arabidopsis development. Sci Rep 2020;10
  65. Sy Nguyen Dinh, Su Jung Park, Ji Hoon Han, Hunseung Kang. A Chloroplast-targeted S1 RNA-binding Domain Protein Plays a Role in Arabidopsis Response to Diverse Abiotic Stresses. J. Plant Biol. 2019;62:74
  66. Liqun Ma, Yongfang Yang, Yuqiu Wang, Ke Cheng, Xiwen Zhou, Jinyan Li, Jingyu Zhang, Ran Li, Lingling Zhang, Keru Wang, Ni Zeng, Yanyan Gong, Danmeng Zhu, Zhiping Deng, Guiqin Qu, Benzhong Zhu, Daqi Fu, Yunbo Luo, Hongliang Zhu. SlRBP1 promotes translational efficiency via SleIF4A2 to maintain chloroplast function in tomato. 2022;34:2747
  67. Valerie Van Ruyskensvelde, Frank Van Breusegem, Katrien Van Der Kelen. Post-transcriptional regulation of the oxidative stress response in plants. Free Radical Biology and Medicine 2018;122:181
  68. Linh Nguyen, Hye-Yeon Seok, Dong-Hyuk Woo, Sun-Young Lee, Yong-Hwan Moon. Overexpression of the DEAD-Box RNA Helicase Gene AtRH17 Confers Tolerance to Salt Stress in Arabidopsis. IJMS 2018;19:3777
  69. Huiyan Zhao, Urmila Basu, Berisso Kebede, Cunmin Qu, Jiana Li, Habibur Rahman, David A. Lightfoot. Fine mapping of the major QTL for seed coat color in Brassica rapa var. Yellow Sarson by use of NIL populations and transcriptome sequencing for identification of the candidate genes. PLoS ONE 2019;14:e0209982
  70. Maria Angeles Decena, Sergio Gálvez-Rojas, Federico Agostini, Ruben Sancho, Bruno Contreras-Moreira, David L. Des Marais, Pilar Hernandez, Pilar Catalán. Comparative Genomics, Evolution, and Drought-Induced Expression of Dehydrin Genes in Model Brachypodium Grasses. Plants 2021;10:2664
  71. Vesper Burjoski, Anireddy S. N. Reddy. The Landscape of RNA-Protein Interactions in Plants: Approaches and Current Status. IJMS 2021;22:2845
  72. Margaret Scarrow, Ning Chen, Genlou Sun. Insights into the N6-methyladenosine mechanism and its functionality: progress and questions. Critical Reviews in Biotechnology 2020;40:639
  73. Ju Young Jung, Cheol Woo Min, Hye Won Shin, Truong Van Nguyen, Ji hyun Kim, Eui Jung Kim, Ick Hyun Jo, Yu Jin Kim, Sun Tae Kim. Label-free Quantitative Proteomic Analysis of Drought-Responsive Proteins in Panax ginseng Meyer. KJMCS 2021;29:369
  74. John P. Davies, Cory A. Christensen. Transgenic Plants. 2021.
  75. Ghazala Nawaz, Hunseung Kang. Rice OsRH58, a chloroplast DEAD-box RNA helicase, improves salt or drought stress tolerance in Arabidopsis by affecting chloroplast translation. BMC Plant Biol 2019;19
  76. Hayoung Song, HyeRan Kim, Byung-Ho Hwang, Hankuil Yi, Yoonkang Hur. Natural variation in glycine-rich region of Brassica oleracea cold shock domain protein 5 (BoCSDP5) is associated with low temperature tolerance. Genes Genom 2020;42:1407
  77. Suvichark Aroonluk, Sittiruk Roytrakul, Yodying Yingchutrakul, Suthathip Kittisenachai, Chatchawan Jantasuriyarat. Identification and characterization of glycoproteins during oil palm somatic embryogenesis. Agriculture and Natural Resources 2018;52:430
  78. Ghazala Nawaz, Than Zaw Tun Sai, Kwanuk Lee, Su Jung Park, Sy Nguyen Dinh, Hunseung Kang. BrRH37, a Cabbage (Brassica rapa) DEAD-Box RNA Helicase, Confers Drought Tolerance and ABA Response in Transgenic Arabidopsis Plants. J. Plant Biol. 2021;64:327
  79. Upendra K Pradhan, Prabina K Meher, Sanchita Naha, Soumen Pal, Sagar Gupta, Ajit Gupta, Rajender Parsad. RBPLight: a computational tool for discovery of plant-specific RNA-binding proteins using light gradient boosting machine and ensemble of evolutionary features. 2023
  80. Ming Wang, Lili Zang, Fuchao Jiao, Maria-Dolores Perez-Garcia, Laurent Ogé, Latifa Hamama, José Le Gourrierec, Soulaiman Sakr, Jingtang Chen. Sugar Signaling and Post-transcriptional Regulation in Plants: An Overlooked or an Emerging Topic?. Front. Plant Sci. 2020;11
  81. Mariana Radkova, Miglena Revalska, Miroslava Zhiponova, Anelia Iantcheva. Evaluation of the role of Medicago truncatula Zn finger CCHC type protein after heterologous expression in Arabidopsis thaliana. Biotechnology & Biotechnological Equipment 2021;35:1686
  82. Quaid Hussain, Jiaqin Shi, Armin Scheben, Jiepeng Zhan, Xinfa Wang, Guihua Liu, Guijun Yan, Graham J. King, David Edwards, Hanzhong Wang. Genetic and signalling pathways of dry fruit size: targets for genome editing‐based crop improvement. Plant Biotechnology Journal 2020;18:1124
  83. Mengmeng Fu, Zhen Xu, Huaying Ma, Yifan Hao, Ji Tian, Yi Wang, Xinzhong Zhang, Xuefeng Xu, Zhenhai Han, Ting Wu. Characteristics of long-distance mobile mRNAs from shoot to root in grafted plant species. Horticultural Plant Journal 2023